Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP4BP1P59074 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
CHMP4BP1P59074 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.57■□□□□ 0.24
CHMP4BP1P59074 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
CHMP4BP1P59074 MIR33B-201ENST00000385104 96 ntBASIC16.57■□□□□ 0.24
CHMP4BP1P59074 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC16.57■□□□□ 0.24
CHMP4BP1P59074 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.57■□□□□ 0.24
CHMP4BP1P59074 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC16.57■□□□□ 0.24
CHMP4BP1P59074 FTLP1-201ENST00000449155 526 ntBASIC16.57■□□□□ 0.24
CHMP4BP1P59074 RPS2P36-201ENST00000456516 831 ntBASIC16.57■□□□□ 0.24
CHMP4BP1P59074 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC16.57■□□□□ 0.24
CHMP4BP1P59074 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC16.57■□□□□ 0.24
CHMP4BP1P59074 SCARNA21-201ENST00000517026 139 ntBASIC16.57■□□□□ 0.24
CHMP4BP1P59074 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC16.57■□□□□ 0.24
CHMP4BP1P59074 AL161670.2-201ENST00000557650 1227 ntBASIC16.57■□□□□ 0.24
CHMP4BP1P59074 PRKXP1-201ENST00000561423 1122 ntBASIC16.57■□□□□ 0.24
CHMP4BP1P59074 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.57■□□□□ 0.24
CHMP4BP1P59074 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP4BP1P59074 MIR6727-201ENST00000620702 65 ntBASIC16.57■□□□□ 0.24
CHMP4BP1P59074 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP4BP1P59074 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP4BP1P59074 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP4BP1P59074 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP4BP1P59074 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.57■□□□□ 0.24
CHMP4BP1P59074 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP4BP1P59074 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 AL138725.1-201ENST00000407347 1314 ntBASIC16.56■□□□□ 0.24
CHMP4BP1P59074 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 PUDPP3-201ENST00000445368 636 ntBASIC16.56■□□□□ 0.24
CHMP4BP1P59074 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 SNORD3B-2-202ENST00000571722 791 ntBASIC16.56■□□□□ 0.24
CHMP4BP1P59074 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 AC132192.2-201ENST00000596206 1147 ntBASIC16.56■□□□□ 0.24
CHMP4BP1P59074 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
CHMP4BP1P59074 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 AC023090.2-201ENST00000625182 2110 ntBASIC16.55■□□□□ 0.24
CHMP4BP1P59074 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 CTBP1-AS2-206ENST00000581398 5652 ntBASIC16.55■□□□□ 0.24
CHMP4BP1P59074 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 AP001267.2-201ENST00000532619 2086 ntBASIC16.55■□□□□ 0.24
CHMP4BP1P59074 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 AC067750.1-201ENST00000608826 6545 ntBASIC16.55■□□□□ 0.24
CHMP4BP1P59074 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CHMP4BP1P59074 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms