Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC17.4■□□□□ 0.38
NUP98P52948 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NUP98P52948 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUP98P52948 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC17.4■□□□□ 0.38
NUP98P52948 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC17.4■□□□□ 0.38
NUP98P52948 AC136604.1-202ENST00000425471 771 ntBASIC17.4■□□□□ 0.38
NUP98P52948 AC092896.1-201ENST00000465850 380 ntBASIC17.4■□□□□ 0.38
NUP98P52948 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC17.4■□□□□ 0.38
NUP98P52948 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC17.4■□□□□ 0.38
NUP98P52948 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC17.4■□□□□ 0.38
NUP98P52948 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC17.4■□□□□ 0.38
NUP98P52948 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC17.4■□□□□ 0.38
NUP98P52948 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUP98P52948 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
NUP98P52948 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
NUP98P52948 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUP98P52948 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUP98P52948 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUP98P52948 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUP98P52948 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
NUP98P52948 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUP98P52948 AC046158.3-201ENST00000624947 2558 ntBASIC17.4■□□□□ 0.38
NUP98P52948 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUP98P52948 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC17.4■□□□□ 0.38
NUP98P52948 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NUP98P52948 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUP98P52948 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
NUP98P52948 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
NUP98P52948 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NUP98P52948 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC17.4■□□□□ 0.38
NUP98P52948 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NUP98P52948 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
NUP98P52948 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUP98P52948 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NUP98P52948 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC17.4■□□□□ 0.38
NUP98P52948 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC17.4■□□□□ 0.38
NUP98P52948 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC17.4■□□□□ 0.38
NUP98P52948 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC17.4■□□□□ 0.38
NUP98P52948 MBP-238ENST00000580402 915 ntTSL 5 BASIC17.4■□□□□ 0.38
NUP98P52948 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC17.4■□□□□ 0.38
NUP98P52948 AC010531.8-201ENST00000623341 685 ntBASIC17.4■□□□□ 0.38
NUP98P52948 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NUP98P52948 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC17.4■□□□□ 0.38
NUP98P52948 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC17.4■□□□□ 0.38
NUP98P52948 DDC-213ENST00000617822 1809 ntTSL 3 BASIC17.4■□□□□ 0.38
NUP98P52948 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC17.39■□□□□ 0.38
NUP98P52948 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.38
NUP98P52948 AC106881.1-201ENST00000605849 3329 ntBASIC17.39■□□□□ 0.38
NUP98P52948 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NUP98P52948 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.39■□□□□ 0.37
NUP98P52948 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NUP98P52948 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC17.39■□□□□ 0.37
NUP98P52948 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC17.39■□□□□ 0.37
NUP98P52948 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NUP98P52948 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NUP98P52948 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
NUP98P52948 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC17.39■□□□□ 0.37
NUP98P52948 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
NUP98P52948 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC17.39■□□□□ 0.37
NUP98P52948 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NUP98P52948 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
NUP98P52948 SALL4P6-201ENST00000429385 1691 ntBASIC17.39■□□□□ 0.37
NUP98P52948 AC093462.1-201ENST00000621167 1683 ntBASIC17.39■□□□□ 0.37
NUP98P52948 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
NUP98P52948 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC17.39■□□□□ 0.37
NUP98P52948 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC17.39■□□□□ 0.37
NUP98P52948 KNOP1P1-201ENST00000542108 989 ntBASIC17.39■□□□□ 0.37
NUP98P52948 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
NUP98P52948 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC17.39■□□□□ 0.37
NUP98P52948 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC17.39■□□□□ 0.37
NUP98P52948 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC17.39■□□□□ 0.37
NUP98P52948 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC17.39■□□□□ 0.37
NUP98P52948 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC17.39■□□□□ 0.37
NUP98P52948 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NUP98P52948 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.37
NUP98P52948 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NUP98P52948 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.39■□□□□ 0.37
NUP98P52948 GOLGA8EP-201ENST00000530246 1959 ntBASIC17.39■□□□□ 0.37
NUP98P52948 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NUP98P52948 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
NUP98P52948 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
NUP98P52948 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NUP98P52948 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
NUP98P52948 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NUP98P52948 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC17.38■□□□□ 0.37
NUP98P52948 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NUP98P52948 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NUP98P52948 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
NUP98P52948 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NUP98P52948 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NUP98P52948 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
NUP98P52948 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NUP98P52948 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC17.38■□□□□ 0.37
NUP98P52948 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC17.38■□□□□ 0.37
NUP98P52948 FAM86KP-201ENST00000509817 987 ntBASIC17.38■□□□□ 0.37
NUP98P52948 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC17.38■□□□□ 0.37
NUP98P52948 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC17.38■□□□□ 0.37
NUP98P52948 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NUP98P52948 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
NUP98P52948 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms