Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MTHFRP42898 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
MTHFRP42898 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
MTHFRP42898 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.04■□□□□ -0
MTHFRP42898 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC15.04■□□□□ -0
MTHFRP42898 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MTHFRP42898 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MTHFRP42898 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MTHFRP42898 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC15.04■□□□□ -0
MTHFRP42898 SAT1-201ENST00000379251 801 ntTSL 2 BASIC15.04■□□□□ -0
MTHFRP42898 SAT1-202ENST00000379253 909 ntTSL 2 BASIC15.04■□□□□ -0
MTHFRP42898 SAT1-203ENST00000379254 868 ntTSL 3 BASIC15.04■□□□□ -0
MTHFRP42898 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MTHFRP42898 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
MTHFRP42898 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC15.04■□□□□ -0
MTHFRP42898 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
MTHFRP42898 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC15.04■□□□□ -0
MTHFRP42898 FAM86B3P-203ENST00000523992 854 ntBASIC15.04■□□□□ -0
MTHFRP42898 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
MTHFRP42898 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC15.04■□□□□ -0
MTHFRP42898 AC226150.1-201ENST00000544259 466 ntBASIC15.04■□□□□ -0
MTHFRP42898 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC15.04■□□□□ -0
MTHFRP42898 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC15.04■□□□□ -0
MTHFRP42898 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC15.04■□□□□ -0
MTHFRP42898 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MTHFRP42898 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.04■□□□□ -0
MTHFRP42898 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
MTHFRP42898 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
MTHFRP42898 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MTHFRP42898 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.04■□□□□ -0
MTHFRP42898 AC005089.1-201ENST00000619486 2241 ntBASIC15.04■□□□□ -0
MTHFRP42898 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.04■□□□□ -0
MTHFRP42898 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.04■□□□□ -0
MTHFRP42898 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
MTHFRP42898 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.04■□□□□ -0
MTHFRP42898 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
MTHFRP42898 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.04■□□□□ -0
MTHFRP42898 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MTHFRP42898 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.03■□□□□ -0
MTHFRP42898 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MTHFRP42898 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.03■□□□□ -0
MTHFRP42898 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
MTHFRP42898 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC15.03■□□□□ -0
MTHFRP42898 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
MTHFRP42898 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC15.03■□□□□ -0
MTHFRP42898 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.03■□□□□ -0
MTHFRP42898 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.03■□□□□ -0
MTHFRP42898 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MTHFRP42898 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC15.03■□□□□ -0
MTHFRP42898 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.03■□□□□ -0
MTHFRP42898 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC15.03■□□□□ -0
MTHFRP42898 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MTHFRP42898 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MTHFRP42898 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
MTHFRP42898 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC15.03■□□□□ -0
MTHFRP42898 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC15.03■□□□□ -0
MTHFRP42898 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC15.03■□□□□ -0
MTHFRP42898 AC092580.1-201ENST00000433998 658 ntBASIC15.03■□□□□ -0
MTHFRP42898 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC15.03■□□□□ -0
MTHFRP42898 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC15.03■□□□□ -0
MTHFRP42898 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC15.03■□□□□ -0
MTHFRP42898 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC15.03■□□□□ -0
MTHFRP42898 AC093909.3-201ENST00000504783 336 ntBASIC15.03■□□□□ -0
MTHFRP42898 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC15.03■□□□□ -0
MTHFRP42898 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC15.03■□□□□ -0
MTHFRP42898 ELP5-212ENST00000574255 671 ntTSL 2 BASIC15.03■□□□□ -0
MTHFRP42898 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC15.03■□□□□ -0
MTHFRP42898 AC055811.3-201ENST00000584952 686 ntBASIC15.03■□□□□ -0
MTHFRP42898 AC009145.4-201ENST00000625119 1294 ntBASIC15.03■□□□□ -0
MTHFRP42898 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC15.03■□□□□ -0
MTHFRP42898 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC15.03■□□□□ -0
MTHFRP42898 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC15.03■□□□□ -0
MTHFRP42898 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MTHFRP42898 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
MTHFRP42898 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
MTHFRP42898 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.03■□□□□ -0
MTHFRP42898 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC15.03■□□□□ -0
MTHFRP42898 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MTHFRP42898 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.03■□□□□ -0
MTHFRP42898 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.03■□□□□ -0
MTHFRP42898 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.03■□□□□ -0
MTHFRP42898 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MTHFRP42898 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
MTHFRP42898 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
MTHFRP42898 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.03■□□□□ -0
MTHFRP42898 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
MTHFRP42898 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
MTHFRP42898 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC15.03■□□□□ -0
MTHFRP42898 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.03■□□□□ -0
MTHFRP42898 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.02■□□□□ -0
MTHFRP42898 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
MTHFRP42898 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MTHFRP42898 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MTHFRP42898 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.02■□□□□ -0
MTHFRP42898 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.02■□□□□ -0
MTHFRP42898 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
MTHFRP42898 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
MTHFRP42898 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.02■□□□□ -0
MTHFRP42898 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.02■□□□□ -0
MTHFRP42898 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms