Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM23P36406 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC14.15□□□□□ -0.14
TRIM23P36406 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC14.15□□□□□ -0.14
TRIM23P36406 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC14.15□□□□□ -0.14
TRIM23P36406 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.15□□□□□ -0.14
TRIM23P36406 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM23P36406 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM23P36406 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM23P36406 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.15□□□□□ -0.14
TRIM23P36406 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM23P36406 AL022313.4-201ENST00000562756 2046 ntBASIC14.15□□□□□ -0.14
TRIM23P36406 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.15□□□□□ -0.14
TRIM23P36406 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRIM23P36406 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM23P36406 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM23P36406 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM23P36406 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
TRIM23P36406 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM23P36406 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
TRIM23P36406 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.14□□□□□ -0.15
TRIM23P36406 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM23P36406 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM23P36406 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
TRIM23P36406 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TRIM23P36406 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRIM23P36406 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM23P36406 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM23P36406 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM23P36406 MYO15B-237ENST00000642007 4893 ntBASIC14.14□□□□□ -0.15
TRIM23P36406 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM23P36406 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TRIM23P36406 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM23P36406 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
TRIM23P36406 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM23P36406 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC14.14□□□□□ -0.15
TRIM23P36406 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM23P36406 AL807761.2-201ENST00000422849 729 ntBASIC14.14□□□□□ -0.15
TRIM23P36406 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC14.14□□□□□ -0.15
TRIM23P36406 TMEM198B-204ENST00000484016 896 ntBASIC14.14□□□□□ -0.15
TRIM23P36406 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRIM23P36406 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC14.14□□□□□ -0.15
TRIM23P36406 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC14.14□□□□□ -0.15
TRIM23P36406 AL512310.5-201ENST00000551999 515 ntBASIC14.14□□□□□ -0.15
TRIM23P36406 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC14.14□□□□□ -0.15
TRIM23P36406 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC14.14□□□□□ -0.15
TRIM23P36406 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.14□□□□□ -0.15
TRIM23P36406 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM23P36406 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
TRIM23P36406 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM23P36406 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM23P36406 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
TRIM23P36406 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM23P36406 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM23P36406 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TRIM23P36406 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.14□□□□□ -0.15
TRIM23P36406 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TRIM23P36406 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TRIM23P36406 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM23P36406 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM23P36406 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM23P36406 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC14.14□□□□□ -0.15
TRIM23P36406 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM23P36406 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM23P36406 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM23P36406 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM23P36406 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.14□□□□□ -0.15
TRIM23P36406 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
TRIM23P36406 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM23P36406 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC14.14□□□□□ -0.15
TRIM23P36406 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.14□□□□□ -0.15
TRIM23P36406 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.14□□□□□ -0.15
TRIM23P36406 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRIM23P36406 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TRIM23P36406 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM23P36406 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM23P36406 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TRIM23P36406 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TRIM23P36406 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM23P36406 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
TRIM23P36406 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM23P36406 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM23P36406 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM23P36406 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM23P36406 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM23P36406 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM23P36406 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC14.13□□□□□ -0.15
TRIM23P36406 BAX-205ENST00000391871 687 ntTSL 5 BASIC14.13□□□□□ -0.15
TRIM23P36406 MPV17-204ENST00000399052 749 ntTSL 4 BASIC14.13□□□□□ -0.15
TRIM23P36406 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRIM23P36406 HINT2P1-201ENST00000419438 481 ntBASIC14.13□□□□□ -0.15
TRIM23P36406 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TRIM23P36406 FTH1P22-201ENST00000456305 520 ntBASIC14.13□□□□□ -0.15
TRIM23P36406 KRT18P15-201ENST00000458108 1291 ntBASIC14.13□□□□□ -0.15
TRIM23P36406 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC14.13□□□□□ -0.15
TRIM23P36406 NDUFS6P1-201ENST00000485187 316 ntBASIC14.13□□□□□ -0.15
TRIM23P36406 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC14.13□□□□□ -0.15
TRIM23P36406 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TRIM23P36406 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC14.13□□□□□ -0.15
TRIM23P36406 RN7SL190P-201ENST00000582519 257 ntBASIC14.13□□□□□ -0.15
TRIM23P36406 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms