Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HOXA6P31267 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
HOXA6P31267 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
HOXA6P31267 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC13.98□□□□□ -0.17
HOXA6P31267 AC004522.1-201ENST00000419978 654 ntBASIC13.98□□□□□ -0.17
HOXA6P31267 AL137244.1-201ENST00000422931 865 ntBASIC13.98□□□□□ -0.17
HOXA6P31267 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
HOXA6P31267 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC13.98□□□□□ -0.17
HOXA6P31267 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC13.98□□□□□ -0.17
HOXA6P31267 HNRNPA1P42-201ENST00000458678 957 ntBASIC13.98□□□□□ -0.17
HOXA6P31267 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC13.98□□□□□ -0.17
HOXA6P31267 MIR2278-201ENST00000516344 96 ntBASIC13.98□□□□□ -0.17
HOXA6P31267 IGHEP1-201ENST00000521393 651 ntBASIC13.98□□□□□ -0.17
HOXA6P31267 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC13.98□□□□□ -0.17
HOXA6P31267 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC13.98□□□□□ -0.17
HOXA6P31267 AC078814.4-201ENST00000546650 327 ntBASIC13.98□□□□□ -0.17
HOXA6P31267 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC13.98□□□□□ -0.17
HOXA6P31267 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC13.98□□□□□ -0.17
HOXA6P31267 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC13.98□□□□□ -0.17
HOXA6P31267 AC126755.5-201ENST00000622756 267 ntBASIC13.98□□□□□ -0.17
HOXA6P31267 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC13.98□□□□□ -0.17
HOXA6P31267 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
HOXA6P31267 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.98□□□□□ -0.17
HOXA6P31267 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HOXA6P31267 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC13.98□□□□□ -0.17
HOXA6P31267 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
HOXA6P31267 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HOXA6P31267 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
HOXA6P31267 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
HOXA6P31267 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HOXA6P31267 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HOXA6P31267 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXA6P31267 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXA6P31267 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC13.97□□□□□ -0.17
HOXA6P31267 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXA6P31267 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HOXA6P31267 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.97□□□□□ -0.17
HOXA6P31267 AC104581.4-201ENST00000623126 3052 ntBASIC13.97□□□□□ -0.17
HOXA6P31267 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.97□□□□□ -0.17
HOXA6P31267 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.97□□□□□ -0.17
HOXA6P31267 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.97□□□□□ -0.17
HOXA6P31267 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXA6P31267 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXA6P31267 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXA6P31267 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
HOXA6P31267 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXA6P31267 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXA6P31267 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC13.97□□□□□ -0.17
HOXA6P31267 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
HOXA6P31267 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HOXA6P31267 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
HOXA6P31267 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC13.97□□□□□ -0.17
HOXA6P31267 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
HOXA6P31267 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
HOXA6P31267 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXA6P31267 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HOXA6P31267 RPSAP12-201ENST00000435879 888 ntBASIC13.97□□□□□ -0.17
HOXA6P31267 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
HOXA6P31267 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC13.97□□□□□ -0.17
HOXA6P31267 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC13.97□□□□□ -0.17
HOXA6P31267 AC025594.1-201ENST00000469533 543 ntBASIC13.97□□□□□ -0.17
HOXA6P31267 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC13.97□□□□□ -0.17
HOXA6P31267 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HOXA6P31267 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC13.97□□□□□ -0.17
HOXA6P31267 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC13.97□□□□□ -0.17
HOXA6P31267 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC13.97□□□□□ -0.17
HOXA6P31267 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC13.97□□□□□ -0.17
HOXA6P31267 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC13.97□□□□□ -0.17
HOXA6P31267 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
HOXA6P31267 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXA6P31267 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.97□□□□□ -0.17
HOXA6P31267 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
HOXA6P31267 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC13.97□□□□□ -0.17
HOXA6P31267 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC13.97□□□□□ -0.17
HOXA6P31267 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC13.97□□□□□ -0.17
HOXA6P31267 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
HOXA6P31267 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXA6P31267 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXA6P31267 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HOXA6P31267 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.97□□□□□ -0.17
HOXA6P31267 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXA6P31267 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.97□□□□□ -0.17
HOXA6P31267 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXA6P31267 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.97□□□□□ -0.17
HOXA6P31267 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXA6P31267 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
HOXA6P31267 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
HOXA6P31267 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
HOXA6P31267 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HOXA6P31267 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
HOXA6P31267 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXA6P31267 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HOXA6P31267 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXA6P31267 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXA6P31267 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC13.96□□□□□ -0.17
HOXA6P31267 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HOXA6P31267 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HOXA6P31267 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HOXA6P31267 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
HOXA6P31267 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms