Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CTSBP07858 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CTSBP07858 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CTSBP07858 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.56□□□□□ -0.24
CTSBP07858 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CTSBP07858 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC13.56□□□□□ -0.24
CTSBP07858 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CTSBP07858 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CTSBP07858 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CTSBP07858 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CTSBP07858 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CTSBP07858 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CTSBP07858 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CTSBP07858 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CTSBP07858 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC13.56□□□□□ -0.24
CTSBP07858 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CTSBP07858 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CTSBP07858 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CTSBP07858 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CTSBP07858 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CTSBP07858 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CTSBP07858 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC13.56□□□□□ -0.24
CTSBP07858 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CTSBP07858 MIR645-201ENST00000385283 94 ntBASIC13.56□□□□□ -0.24
CTSBP07858 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC13.56□□□□□ -0.24
CTSBP07858 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CTSBP07858 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC13.56□□□□□ -0.24
CTSBP07858 FTH1P22-201ENST00000456305 520 ntBASIC13.56□□□□□ -0.24
CTSBP07858 LY6E-208ENST00000520531 490 ntTSL 2 BASIC13.56□□□□□ -0.24
CTSBP07858 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CTSBP07858 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC13.56□□□□□ -0.24
CTSBP07858 AL021707.6-201ENST00000609212 491 ntBASIC13.56□□□□□ -0.24
CTSBP07858 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CTSBP07858 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC13.56□□□□□ -0.24
CTSBP07858 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CTSBP07858 AC051619.9-201ENST00000623237 597 ntBASIC13.56□□□□□ -0.24
CTSBP07858 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CTSBP07858 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.56□□□□□ -0.24
CTSBP07858 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CTSBP07858 AL591122.2-201ENST00000624125 1853 ntBASIC13.56□□□□□ -0.24
CTSBP07858 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CTSBP07858 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CTSBP07858 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CTSBP07858 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CTSBP07858 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC13.56□□□□□ -0.24
CTSBP07858 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.56□□□□□ -0.24
CTSBP07858 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
CTSBP07858 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.56□□□□□ -0.24
CTSBP07858 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CTSBP07858 AC016397.2-201ENST00000624848 1985 ntBASIC13.56□□□□□ -0.24
CTSBP07858 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CTSBP07858 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CTSBP07858 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CTSBP07858 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CTSBP07858 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CTSBP07858 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.56□□□□□ -0.24
CTSBP07858 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CTSBP07858 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CTSBP07858 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CTSBP07858 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
CTSBP07858 AL009178.2-201ENST00000597278 2719 ntBASIC13.55□□□□□ -0.24
CTSBP07858 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CTSBP07858 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CTSBP07858 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CTSBP07858 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.55□□□□□ -0.24
CTSBP07858 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CTSBP07858 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CTSBP07858 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CTSBP07858 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CTSBP07858 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CTSBP07858 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CTSBP07858 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CTSBP07858 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CTSBP07858 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CTSBP07858 HSPA7-201ENST00000445535 1927 ntBASIC13.55□□□□□ -0.24
CTSBP07858 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.55□□□□□ -0.24
CTSBP07858 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CTSBP07858 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CTSBP07858 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CTSBP07858 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CTSBP07858 AP000356.3-201ENST00000382243 753 ntBASIC13.55□□□□□ -0.24
CTSBP07858 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CTSBP07858 AC026316.1-201ENST00000398900 414 ntBASIC13.55□□□□□ -0.24
CTSBP07858 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CTSBP07858 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC13.55□□□□□ -0.24
CTSBP07858 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC13.55□□□□□ -0.24
CTSBP07858 FTLP1-201ENST00000449155 526 ntBASIC13.55□□□□□ -0.24
CTSBP07858 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC13.55□□□□□ -0.24
CTSBP07858 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC13.55□□□□□ -0.24
CTSBP07858 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CTSBP07858 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC13.55□□□□□ -0.24
CTSBP07858 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC13.55□□□□□ -0.24
CTSBP07858 MRPL22P1-201ENST00000505398 616 ntBASIC13.55□□□□□ -0.24
CTSBP07858 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC13.55□□□□□ -0.24
CTSBP07858 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CTSBP07858 AL512310.5-201ENST00000551999 515 ntBASIC13.55□□□□□ -0.24
CTSBP07858 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CTSBP07858 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CTSBP07858 MIR3147-201ENST00000577811 66 ntBASIC13.55□□□□□ -0.24
CTSBP07858 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms