Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.08■□□□□ 0
RB1P06400 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RB1P06400 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RB1P06400 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
RB1P06400 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.08■□□□□ 0
RB1P06400 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RB1P06400 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.07■□□□□ 0
RB1P06400 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.07■□□□□ 0
RB1P06400 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.07■□□□□ 0
RB1P06400 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RB1P06400 AC018442.1-201ENST00000421439 2061 ntBASIC15.07■□□□□ 0
RB1P06400 LINC00554-201ENST00000564841 3011 ntBASIC15.07■□□□□ 0
RB1P06400 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RB1P06400 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RB1P06400 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RB1P06400 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.07■□□□□ 0
RB1P06400 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RB1P06400 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.07■□□□□ 0
RB1P06400 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RB1P06400 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
RB1P06400 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.07■□□□□ 0
RB1P06400 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RB1P06400 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.07■□□□□ 0
RB1P06400 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RB1P06400 PTGER4P2-201ENST00000328411 252 ntBASIC15.07■□□□□ 0
RB1P06400 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC15.07■□□□□ 0
RB1P06400 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
RB1P06400 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC15.07■□□□□ 0
RB1P06400 AL929302.1-201ENST00000426556 871 ntBASIC15.07■□□□□ 0
RB1P06400 NME6-208ENST00000435684 599 ntTSL 2 BASIC15.07■□□□□ 0
RB1P06400 PTGER4P3-201ENST00000458150 252 ntBASIC15.07■□□□□ 0
RB1P06400 F11R-204ENST00000537746 1245 ntTSL 2 BASIC15.07■□□□□ 0
RB1P06400 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
RB1P06400 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC15.07■□□□□ 0
RB1P06400 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC15.07■□□□□ 0
RB1P06400 MBP-238ENST00000580402 915 ntTSL 5 BASIC15.07■□□□□ 0
RB1P06400 MIR6074-201ENST00000612054 107 ntBASIC15.07■□□□□ 0
RB1P06400 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC15.07■□□□□ 0
RB1P06400 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.07■□□□□ 0
RB1P06400 LINC00115-201ENST00000473798 1317 ntBASIC15.07■□□□□ 0
RB1P06400 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.07■□□□□ 0
RB1P06400 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.07■□□□□ 0
RB1P06400 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RB1P06400 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC15.07■□□□□ 0
RB1P06400 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.07■□□□□ 0
RB1P06400 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.07■□□□□ 0
RB1P06400 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC15.07■□□□□ 0
RB1P06400 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC15.07■□□□□ 0
RB1P06400 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RB1P06400 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.07■□□□□ 0
RB1P06400 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
RB1P06400 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RB1P06400 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.07■□□□□ 0
RB1P06400 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RB1P06400 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.06■□□□□ 0
RB1P06400 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.06■□□□□ 0
RB1P06400 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RB1P06400 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.06■□□□□ 0
RB1P06400 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RB1P06400 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.06■□□□□ 0
RB1P06400 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
RB1P06400 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
RB1P06400 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RB1P06400 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RB1P06400 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RB1P06400 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RB1P06400 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
RB1P06400 OR2W2P-201ENST00000406313 909 ntBASIC15.06■□□□□ 0
RB1P06400 AP000244.1-201ENST00000424582 201 ntBASIC15.06■□□□□ 0
RB1P06400 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC15.06■□□□□ 0
RB1P06400 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC15.06■□□□□ 0
RB1P06400 AC025186.1-201ENST00000478174 870 ntBASIC15.06■□□□□ 0
RB1P06400 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC15.06■□□□□ 0
RB1P06400 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
RB1P06400 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC15.06■□□□□ 0
RB1P06400 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RB1P06400 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC15.06■□□□□ 0
RB1P06400 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC15.06■□□□□ 0
RB1P06400 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC15.06■□□□□ 0
RB1P06400 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC15.06■□□□□ 0
RB1P06400 AC027139.1-201ENST00000565286 951 ntBASIC15.06■□□□□ 0
RB1P06400 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC15.06■□□□□ 0
RB1P06400 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC15.06■□□□□ 0
RB1P06400 CASP16P-204ENST00000635032 809 ntBASIC15.06■□□□□ 0
RB1P06400 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RB1P06400 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.06■□□□□ 0
RB1P06400 PPT1-215ENST00000641471 2368 ntBASIC15.06■□□□□ 0
RB1P06400 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.06■□□□□ 0
RB1P06400 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC15.06■□□□□ 0
RB1P06400 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC15.06■□□□□ 0
RB1P06400 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.06■□□□□ 0
RB1P06400 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RB1P06400 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RB1P06400 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.06■□□□□ 0
RB1P06400 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
RB1P06400 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RB1P06400 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RB1P06400 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
RB1P06400 AMT-256ENST00000638063 1783 ntTSL 5 BASIC15.06■□□□□ 0
RB1P06400 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms