Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPNS1P04632 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CAPNS1P04632 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC14.39□□□□□ -0.11
CAPNS1P04632 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CAPNS1P04632 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CAPNS1P04632 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPNS1P04632 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPNS1P04632 AC090505.1-201ENST00000430515 1834 ntBASIC14.39□□□□□ -0.11
CAPNS1P04632 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CAPNS1P04632 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
CAPNS1P04632 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPNS1P04632 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CAPNS1P04632 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CAPNS1P04632 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPNS1P04632 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPNS1P04632 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CAPNS1P04632 RPL18P13-201ENST00000478088 569 ntBASIC14.39□□□□□ -0.11
CAPNS1P04632 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.39□□□□□ -0.11
CAPNS1P04632 AC106820.3-201ENST00000561653 397 ntBASIC14.39□□□□□ -0.11
CAPNS1P04632 SNORD3B-2-202ENST00000571722 791 ntBASIC14.39□□□□□ -0.11
CAPNS1P04632 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC14.39□□□□□ -0.11
CAPNS1P04632 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.39□□□□□ -0.11
CAPNS1P04632 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPNS1P04632 INE2-201ENST00000630399 1874 ntBASIC14.39□□□□□ -0.11
CAPNS1P04632 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPNS1P04632 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPNS1P04632 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPNS1P04632 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.39□□□□□ -0.11
CAPNS1P04632 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.39□□□□□ -0.11
CAPNS1P04632 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPNS1P04632 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CAPNS1P04632 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPNS1P04632 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPNS1P04632 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
CAPNS1P04632 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CAPNS1P04632 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CAPNS1P04632 MIR600HG-201ENST00000449175 5984 ntBASIC14.38□□□□□ -0.11
CAPNS1P04632 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPNS1P04632 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CAPNS1P04632 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.38□□□□□ -0.11
CAPNS1P04632 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CAPNS1P04632 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPNS1P04632 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CAPNS1P04632 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.38□□□□□ -0.11
CAPNS1P04632 AL354702.1-201ENST00000442006 1960 ntBASIC14.38□□□□□ -0.11
CAPNS1P04632 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
CAPNS1P04632 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.38□□□□□ -0.11
CAPNS1P04632 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPNS1P04632 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
CAPNS1P04632 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
CAPNS1P04632 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPNS1P04632 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CAPNS1P04632 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.38□□□□□ -0.11
CAPNS1P04632 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPNS1P04632 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPNS1P04632 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPNS1P04632 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CAPNS1P04632 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPNS1P04632 RN7SKP214-201ENST00000364208 315 ntBASIC14.38□□□□□ -0.11
CAPNS1P04632 FAU-202ENST00000434372 533 ntTSL 2 BASIC14.38□□□□□ -0.11
CAPNS1P04632 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.38□□□□□ -0.11
CAPNS1P04632 AC073150.1-201ENST00000450406 1084 ntBASIC14.38□□□□□ -0.11
CAPNS1P04632 AC130709.1-201ENST00000484779 1212 ntBASIC14.38□□□□□ -0.11
CAPNS1P04632 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC14.38□□□□□ -0.11
CAPNS1P04632 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPNS1P04632 AP002803.1-201ENST00000528836 498 ntBASIC14.38□□□□□ -0.11
CAPNS1P04632 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC14.38□□□□□ -0.11
CAPNS1P04632 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPNS1P04632 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
CAPNS1P04632 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.38□□□□□ -0.11
CAPNS1P04632 AC090164.2-201ENST00000611487 516 ntBASIC14.38□□□□□ -0.11
CAPNS1P04632 AL162426.1-201ENST00000624141 743 ntBASIC14.38□□□□□ -0.11
CAPNS1P04632 AL645728.2-202ENST00000641679 227 ntBASIC14.38□□□□□ -0.11
CAPNS1P04632 REXO1L4P-201ENST00000605109 1937 ntBASIC14.38□□□□□ -0.11
CAPNS1P04632 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CAPNS1P04632 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CAPNS1P04632 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPNS1P04632 TBC1D3J-201ENST00000620719 1426 ntBASIC14.38□□□□□ -0.11
CAPNS1P04632 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.38□□□□□ -0.11
CAPNS1P04632 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CAPNS1P04632 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPNS1P04632 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPNS1P04632 AC007787.1-201ENST00000588095 1583 ntBASIC14.38□□□□□ -0.11
CAPNS1P04632 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CAPNS1P04632 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPNS1P04632 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CAPNS1P04632 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPNS1P04632 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CAPNS1P04632 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CAPNS1P04632 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CAPNS1P04632 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CAPNS1P04632 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CAPNS1P04632 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CAPNS1P04632 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.37□□□□□ -0.11
CAPNS1P04632 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.37□□□□□ -0.11
CAPNS1P04632 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CAPNS1P04632 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.37□□□□□ -0.11
CAPNS1P04632 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CAPNS1P04632 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CAPNS1P04632 PCDHA3-202ENST00000532566 4594 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms