Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
LTAP01374 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
LTAP01374 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
LTAP01374 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
LTAP01374 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
LTAP01374 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
LTAP01374 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC10.89□□□□□ -0.67
LTAP01374 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC10.89□□□□□ -0.67
LTAP01374 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LTAP01374 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LTAP01374 PHB-210ENST00000511832 1509 ntTSL 2 BASIC10.89□□□□□ -0.67
LTAP01374 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LTAP01374 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LTAP01374 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC10.89□□□□□ -0.67
LTAP01374 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC10.89□□□□□ -0.67
LTAP01374 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC10.89□□□□□ -0.67
LTAP01374 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LTAP01374 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LTAP01374 AC026271.4-201ENST00000578214 1833 ntBASIC10.89□□□□□ -0.67
LTAP01374 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC10.89□□□□□ -0.67
LTAP01374 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LTAP01374 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
LTAP01374 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LTAP01374 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LTAP01374 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
LTAP01374 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LTAP01374 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
LTAP01374 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC10.89□□□□□ -0.67
LTAP01374 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LTAP01374 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LTAP01374 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
LTAP01374 AC211486.1-202ENST00000416371 468 ntBASIC10.89□□□□□ -0.67
LTAP01374 CNN2P11-201ENST00000429351 262 ntBASIC10.89□□□□□ -0.67
LTAP01374 MESTP3-201ENST00000503460 968 ntBASIC10.89□□□□□ -0.67
LTAP01374 AC211476.1-201ENST00000503899 468 ntBASIC10.89□□□□□ -0.67
LTAP01374 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC10.89□□□□□ -0.67
LTAP01374 AC015911.4-201ENST00000588022 1070 ntBASIC10.89□□□□□ -0.67
LTAP01374 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC10.89□□□□□ -0.67
LTAP01374 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC10.89□□□□□ -0.67
LTAP01374 AC027612.4-201ENST00000605371 583 ntBASIC10.89□□□□□ -0.67
LTAP01374 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LTAP01374 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC10.89□□□□□ -0.67
LTAP01374 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
LTAP01374 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LTAP01374 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC10.89□□□□□ -0.67
LTAP01374 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LTAP01374 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LTAP01374 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
LTAP01374 AL031719.1-201ENST00000623365 2587 ntBASIC10.89□□□□□ -0.67
LTAP01374 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
LTAP01374 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LTAP01374 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
LTAP01374 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC10.89□□□□□ -0.67
LTAP01374 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
LTAP01374 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
LTAP01374 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC10.89□□□□□ -0.67
LTAP01374 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC10.88□□□□□ -0.67
LTAP01374 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
LTAP01374 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LTAP01374 CLUHP2-201ENST00000426660 1303 ntBASIC10.88□□□□□ -0.67
LTAP01374 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
LTAP01374 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LTAP01374 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC10.88□□□□□ -0.67
LTAP01374 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
LTAP01374 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LTAP01374 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC10.88□□□□□ -0.67
LTAP01374 LINC01165-201ENST00000445190 1623 ntBASIC10.88□□□□□ -0.67
LTAP01374 USP39-207ENST00000450066 2086 ntTSL 2 BASIC10.88□□□□□ -0.67
LTAP01374 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC10.88□□□□□ -0.67
LTAP01374 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
LTAP01374 AL731571.1-201ENST00000617058 5428 ntBASIC10.88□□□□□ -0.67
LTAP01374 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
LTAP01374 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
LTAP01374 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
LTAP01374 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
LTAP01374 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
LTAP01374 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LTAP01374 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
LTAP01374 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LTAP01374 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC10.88□□□□□ -0.67
LTAP01374 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
LTAP01374 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LTAP01374 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LTAP01374 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC10.88□□□□□ -0.67
LTAP01374 SOCS2P1-201ENST00000417727 557 ntBASIC10.88□□□□□ -0.67
LTAP01374 TSSK5P-201ENST00000423978 907 ntBASIC10.88□□□□□ -0.67
LTAP01374 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LTAP01374 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC10.88□□□□□ -0.67
LTAP01374 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC10.88□□□□□ -0.67
LTAP01374 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
LTAP01374 AC112482.1-201ENST00000492080 688 ntBASIC10.88□□□□□ -0.67
LTAP01374 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC10.88□□□□□ -0.67
LTAP01374 AC097493.3-201ENST00000509725 367 ntBASIC10.88□□□□□ -0.67
LTAP01374 MSNP1-201ENST00000511640 1732 ntBASIC10.88□□□□□ -0.67
LTAP01374 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC10.88□□□□□ -0.67
LTAP01374 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
LTAP01374 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC10.88□□□□□ -0.67
LTAP01374 TPRX2P-201ENST00000535362 881 ntBASIC10.88□□□□□ -0.67
LTAP01374 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC10.88□□□□□ -0.67
LTAP01374 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC10.88□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms