Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 MBP-202ENST00000355994 2772 ntTSL 5 BASIC6.19□□□□□ -1.42
USH2AO75445 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC6.19□□□□□ -1.42
USH2AO75445 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
USH2AO75445 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC6.19□□□□□ -1.42
USH2AO75445 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC6.19□□□□□ -1.42
USH2AO75445 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
USH2AO75445 SSR4P1-201ENST00000415143 412 ntBASIC6.19□□□□□ -1.42
USH2AO75445 RPSAP70-201ENST00000504462 864 ntBASIC6.19□□□□□ -1.42
USH2AO75445 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC6.19□□□□□ -1.42
USH2AO75445 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC6.19□□□□□ -1.42
USH2AO75445 AC010776.3-201ENST00000617349 424 ntBASIC6.19□□□□□ -1.42
USH2AO75445 GARS-210ENST00000627489 324 ntTSL 4 BASIC6.19□□□□□ -1.42
USH2AO75445 PUDPP2-202ENST00000628080 737 ntTSL 5 BASIC6.19□□□□□ -1.42
USH2AO75445 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
USH2AO75445 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
USH2AO75445 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
USH2AO75445 ENO3-201ENST00000323997 1521 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
USH2AO75445 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
USH2AO75445 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
USH2AO75445 DEGS1-202ENST00000391877 1345 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
USH2AO75445 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
USH2AO75445 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC6.19□□□□□ -1.42
USH2AO75445 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC6.19□□□□□ -1.42
USH2AO75445 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
USH2AO75445 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC6.19□□□□□ -1.42
USH2AO75445 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC6.19□□□□□ -1.42
USH2AO75445 AC023590.1-202ENST00000366457 781 ntTSL 3 BASIC6.19□□□□□ -1.42
USH2AO75445 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC6.19□□□□□ -1.42
USH2AO75445 GAPDHP65-201ENST00000425487 1006 ntBASIC6.19□□□□□ -1.42
USH2AO75445 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC6.19□□□□□ -1.42
USH2AO75445 AC005920.4-201ENST00000573301 492 ntTSL 4 BASIC6.19□□□□□ -1.42
USH2AO75445 RPL26-206ENST00000582556 763 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
USH2AO75445 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC6.19□□□□□ -1.42
USH2AO75445 AL033381.2-201ENST00000603854 732 ntBASIC6.19□□□□□ -1.42
USH2AO75445 AC123912.6-201ENST00000612657 315 ntBASIC6.19□□□□□ -1.42
USH2AO75445 LINC01615-203ENST00000634877 673 ntTSL 5 BASIC6.19□□□□□ -1.42
USH2AO75445 AC010325.1-203ENST00000636757 380 ntAPPRIS P5 TSL 5 BASIC6.19□□□□□ -1.42
USH2AO75445 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
USH2AO75445 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC6.19□□□□□ -1.42
USH2AO75445 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
USH2AO75445 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
USH2AO75445 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC6.19□□□□□ -1.42
USH2AO75445 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
USH2AO75445 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
USH2AO75445 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC6.19□□□□□ -1.42
USH2AO75445 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
USH2AO75445 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
USH2AO75445 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 C1QTNF3-201ENST00000231338 1959 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
USH2AO75445 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 SIGLEC17P-204ENST00000618545 1517 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 AC139749.1-202ENST00000617529 3139 ntBASIC6.18□□□□□ -1.42
USH2AO75445 CCT8L1P-201ENST00000465400 1674 ntBASIC6.18□□□□□ -1.42
USH2AO75445 ALDOAP2-201ENST00000398050 1076 ntBASIC6.18□□□□□ -1.42
USH2AO75445 HMGN1P4-201ENST00000419500 290 ntBASIC6.18□□□□□ -1.42
USH2AO75445 TSEN15P3-201ENST00000422363 367 ntBASIC6.18□□□□□ -1.42
USH2AO75445 CD44-224ENST00000526669 870 ntTSL 5 BASIC6.18□□□□□ -1.42
USH2AO75445 AC003965.2-201ENST00000577140 265 ntTSL 3 BASIC6.18□□□□□ -1.42
USH2AO75445 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC6.18□□□□□ -1.42
USH2AO75445 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC6.18□□□□□ -1.42
USH2AO75445 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
USH2AO75445 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
USH2AO75445 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
USH2AO75445 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
USH2AO75445 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC6.18□□□□□ -1.42
USH2AO75445 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
USH2AO75445 EGLN3-205ENST00000547327 2849 ntBASIC6.18□□□□□ -1.42
USH2AO75445 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC6.18□□□□□ -1.42
USH2AO75445 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC6.18□□□□□ -1.42
USH2AO75445 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC6.18□□□□□ -1.42
USH2AO75445 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 TSACC-203ENST00000368253 512 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC6.18□□□□□ -1.42
USH2AO75445 IFNWP19-201ENST00000438727 566 ntBASIC6.18□□□□□ -1.42
USH2AO75445 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 WISP1-205ENST00000519433 545 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 RAB42P1-201ENST00000555078 316 ntBASIC6.18□□□□□ -1.42
USH2AO75445 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC6.18□□□□□ -1.42
USH2AO75445 AC010601.1-201ENST00000569048 446 ntTSL 5 BASIC6.18□□□□□ -1.42
USH2AO75445 AC010531.7-201ENST00000602665 465 ntTSL 3 BASIC6.18□□□□□ -1.42
USH2AO75445 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
USH2AO75445 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
USH2AO75445 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms