Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.84□□□□□ -0.19
PDLIM1O00151 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.84□□□□□ -0.19
PDLIM1O00151 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.84□□□□□ -0.19
PDLIM1O00151 AC055876.2-201ENST00000531834 546 ntBASIC13.84□□□□□ -0.19
PDLIM1O00151 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.19
PDLIM1O00151 RRP7BP-205ENST00000566851 833 ntBASIC13.84□□□□□ -0.19
PDLIM1O00151 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.84□□□□□ -0.19
PDLIM1O00151 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
PDLIM1O00151 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
PDLIM1O00151 AC007541.1-201ENST00000570282 1469 ntBASIC13.84□□□□□ -0.19
PDLIM1O00151 IL1RAP-211ENST00000439062 2244 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
PDLIM1O00151 PLSCR4-203ENST00000433593 2839 ntTSL 2 BASIC13.84□□□□□ -0.19
PDLIM1O00151 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13.84□□□□□ -0.19
PDLIM1O00151 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PDLIM1O00151 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PDLIM1O00151 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDLIM1O00151 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC13.84□□□□□ -0.19
PDLIM1O00151 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDLIM1O00151 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PDLIM1O00151 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDLIM1O00151 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.84□□□□□ -0.19
PDLIM1O00151 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PDLIM1O00151 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
PDLIM1O00151 KHSRPP1-201ENST00000427983 1768 ntBASIC13.83□□□□□ -0.19
PDLIM1O00151 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
PDLIM1O00151 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
PDLIM1O00151 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
PDLIM1O00151 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
PDLIM1O00151 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
PDLIM1O00151 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
PDLIM1O00151 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
PDLIM1O00151 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
PDLIM1O00151 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC13.83□□□□□ -0.19
PDLIM1O00151 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.83□□□□□ -0.2
PDLIM1O00151 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM1O00151 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM1O00151 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.83□□□□□ -0.2
PDLIM1O00151 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.83□□□□□ -0.2
PDLIM1O00151 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM1O00151 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM1O00151 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM1O00151 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM1O00151 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.83□□□□□ -0.2
PDLIM1O00151 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.83□□□□□ -0.2
PDLIM1O00151 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.83□□□□□ -0.2
PDLIM1O00151 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.83□□□□□ -0.2
PDLIM1O00151 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.83□□□□□ -0.2
PDLIM1O00151 UBTFL8-201ENST00000426903 2112 ntBASIC13.83□□□□□ -0.2
PDLIM1O00151 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
PDLIM1O00151 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.83□□□□□ -0.2
PDLIM1O00151 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.83□□□□□ -0.2
PDLIM1O00151 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM1O00151 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.83□□□□□ -0.2
PDLIM1O00151 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.83□□□□□ -0.2
PDLIM1O00151 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.83□□□□□ -0.2
PDLIM1O00151 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.83□□□□□ -0.2
PDLIM1O00151 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.83□□□□□ -0.2
PDLIM1O00151 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.83□□□□□ -0.2
PDLIM1O00151 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.83□□□□□ -0.2
PDLIM1O00151 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
PDLIM1O00151 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM1O00151 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM1O00151 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.83□□□□□ -0.2
PDLIM1O00151 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.83□□□□□ -0.2
PDLIM1O00151 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM1O00151 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
PDLIM1O00151 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.83□□□□□ -0.2
PDLIM1O00151 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM1O00151 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM1O00151 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM1O00151 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM1O00151 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM1O00151 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC13.83□□□□□ -0.2
PDLIM1O00151 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
PDLIM1O00151 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM1O00151 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC13.83□□□□□ -0.2
PDLIM1O00151 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.83□□□□□ -0.2
PDLIM1O00151 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM1O00151 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM1O00151 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
PDLIM1O00151 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
PDLIM1O00151 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.83□□□□□ -0.2
PDLIM1O00151 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM1O00151 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PDLIM1O00151 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
PDLIM1O00151 CCT7P1-201ENST00000406551 1611 ntBASIC13.82□□□□□ -0.2
PDLIM1O00151 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
PDLIM1O00151 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDLIM1O00151 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.82□□□□□ -0.2
PDLIM1O00151 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PDLIM1O00151 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDLIM1O00151 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC13.82□□□□□ -0.2
PDLIM1O00151 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PDLIM1O00151 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC13.82□□□□□ -0.2
PDLIM1O00151 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC13.82□□□□□ -0.2
PDLIM1O00151 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.82□□□□□ -0.2
PDLIM1O00151 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PDLIM1O00151 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
PDLIM1O00151 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
PDLIM1O00151 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms