Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 ATL2-204ENST00000406122 2864 ntTSL 5 BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 AC007969.1-201ENST00000433675 447 ntBASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 TIMM8BP1-201ENST00000452384 211 ntBASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 CD63-204ENST00000546939 779 ntTSL 3 BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 AL022313.4-201ENST00000562756 2046 ntBASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 AC104758.3-203ENST00000562938 2123 ntBASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 TMEM147-AS1-205ENST00000590717 3300 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 SPOCK3-203ENST00000421836 3061 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 FAM58CP-201ENST00000435741 640 ntBASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 AL079307.3-201ENST00000556114 283 ntBASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 RMI2-205ENST00000576027 818 ntTSL 2 BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC12.23□□□□□ -0.45
SEC22CQ9BRL7 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms