Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
AP1S3Q96PC3 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC11□□□□□ -0.65
AP1S3Q96PC3 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC11□□□□□ -0.65
AP1S3Q96PC3 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
AP1S3Q96PC3 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC11□□□□□ -0.65
AP1S3Q96PC3 PKD1L2-210ENST00000533478 5669 ntTSL 1 (best) BASIC11□□□□□ -0.65
AP1S3Q96PC3 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC11□□□□□ -0.65
AP1S3Q96PC3 BCL2L11-206ENST00000393256 5086 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
AP1S3Q96PC3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
AP1S3Q96PC3 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
AP1S3Q96PC3 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
AP1S3Q96PC3 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC11□□□□□ -0.65
AP1S3Q96PC3 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
AP1S3Q96PC3 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
AP1S3Q96PC3 EFHC1-201ENST00000371068 6987 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
AP1S3Q96PC3 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
AP1S3Q96PC3 NSD3-202ENST00000317025 10776 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
AP1S3Q96PC3 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC11□□□□□ -0.65
AP1S3Q96PC3 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
AP1S3Q96PC3 ELL2P1-201ENST00000413990 1906 ntBASIC11□□□□□ -0.65
AP1S3Q96PC3 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
AP1S3Q96PC3 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
AP1S3Q96PC3 MVK-214ENST00000629016 1591 ntTSL 5 BASIC11□□□□□ -0.65
AP1S3Q96PC3 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC11□□□□□ -0.65
AP1S3Q96PC3 WDR31-201ENST00000341761 4862 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
AP1S3Q96PC3 WDR31-202ENST00000374193 4878 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
AP1S3Q96PC3 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC11□□□□□ -0.65
AP1S3Q96PC3 RIN2-201ENST00000255006 4505 ntAPPRIS P2 TSL 2 BASIC11□□□□□ -0.65
AP1S3Q96PC3 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
AP1S3Q96PC3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
AP1S3Q96PC3 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
AP1S3Q96PC3 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
AP1S3Q96PC3 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC11□□□□□ -0.65
AP1S3Q96PC3 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
AP1S3Q96PC3 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
AP1S3Q96PC3 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC11□□□□□ -0.65
AP1S3Q96PC3 AL080243.2-201ENST00000418783 582 ntBASIC11□□□□□ -0.65
AP1S3Q96PC3 SPDYE7P-202ENST00000420373 878 ntBASIC11□□□□□ -0.65
AP1S3Q96PC3 AC004832.2-201ENST00000426397 482 ntBASIC11□□□□□ -0.65
AP1S3Q96PC3 RPL13P2-201ENST00000440687 659 ntBASIC11□□□□□ -0.65
AP1S3Q96PC3 CEND1P1-201ENST00000451006 455 ntBASIC11□□□□□ -0.65
AP1S3Q96PC3 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC11□□□□□ -0.65
AP1S3Q96PC3 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC11□□□□□ -0.65
AP1S3Q96PC3 PUS1-205ENST00000535067 838 ntTSL 3 BASIC11□□□□□ -0.65
AP1S3Q96PC3 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC11□□□□□ -0.65
AP1S3Q96PC3 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC11□□□□□ -0.65
AP1S3Q96PC3 CCND1-203ENST00000536559 553 ntTSL 3 BASIC11□□□□□ -0.65
AP1S3Q96PC3 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC11□□□□□ -0.65
AP1S3Q96PC3 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC11□□□□□ -0.65
AP1S3Q96PC3 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC11□□□□□ -0.65
AP1S3Q96PC3 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC11□□□□□ -0.65
AP1S3Q96PC3 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC11□□□□□ -0.65
AP1S3Q96PC3 KLK8-205ENST00000593490 267 ntTSL 3 BASIC11□□□□□ -0.65
AP1S3Q96PC3 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC11□□□□□ -0.65
AP1S3Q96PC3 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC11□□□□□ -0.65
AP1S3Q96PC3 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC11□□□□□ -0.65
AP1S3Q96PC3 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC11□□□□□ -0.65
AP1S3Q96PC3 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC11□□□□□ -0.65
AP1S3Q96PC3 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC11□□□□□ -0.65
AP1S3Q96PC3 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC11□□□□□ -0.65
AP1S3Q96PC3 GRAMD4P3-201ENST00000621665 1669 ntBASIC11□□□□□ -0.65
AP1S3Q96PC3 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
AP1S3Q96PC3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC11□□□□□ -0.65
AP1S3Q96PC3 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
AP1S3Q96PC3 AL360270.3-201ENST00000609118 1348 ntBASIC11□□□□□ -0.65
AP1S3Q96PC3 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC11□□□□□ -0.65
AP1S3Q96PC3 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
AP1S3Q96PC3 CBLB-201ENST00000264122 6780 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
AP1S3Q96PC3 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
AP1S3Q96PC3 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC11□□□□□ -0.65
AP1S3Q96PC3 MCM4-215ENST00000523944 4105 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
AP1S3Q96PC3 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC11□□□□□ -0.65
AP1S3Q96PC3 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC11□□□□□ -0.65
AP1S3Q96PC3 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC11□□□□□ -0.65
AP1S3Q96PC3 GOLGA6L4-203ENST00000510439 4563 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
AP1S3Q96PC3 VAT1L-201ENST00000302536 3825 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
AP1S3Q96PC3 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
AP1S3Q96PC3 ATP8B2-202ENST00000368489 5861 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
AP1S3Q96PC3 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
AP1S3Q96PC3 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
AP1S3Q96PC3 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
AP1S3Q96PC3 AC022400.8-201ENST00000623453 3599 ntBASIC11□□□□□ -0.65
AP1S3Q96PC3 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
AP1S3Q96PC3 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
AP1S3Q96PC3 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 TNRC18P1-201ENST00000502875 3650 ntBASIC10.99□□□□□ -0.65
AP1S3Q96PC3 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 NLRP1-208ENST00000571451 5444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
AP1S3Q96PC3 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC10.99□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms