Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CASD1Q96PB1 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CASD1Q96PB1 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CASD1Q96PB1 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CASD1Q96PB1 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC15.16■□□□□ 0.02
CASD1Q96PB1 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CASD1Q96PB1 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CASD1Q96PB1 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.16■□□□□ 0.02
CASD1Q96PB1 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CASD1Q96PB1 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.16■□□□□ 0.02
CASD1Q96PB1 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CASD1Q96PB1 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CASD1Q96PB1 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CASD1Q96PB1 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CASD1Q96PB1 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CASD1Q96PB1 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CASD1Q96PB1 OR7E115P-201ENST00000382617 1024 ntBASIC15.16■□□□□ 0.02
CASD1Q96PB1 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CASD1Q96PB1 RPL3P2-204ENST00000413027 1203 ntBASIC15.16■□□□□ 0.02
CASD1Q96PB1 HMGA1P1-201ENST00000415560 1062 ntBASIC15.16■□□□□ 0.02
CASD1Q96PB1 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC15.16■□□□□ 0.02
CASD1Q96PB1 HCG27-204ENST00000424675 895 ntTSL 3 BASIC15.16■□□□□ 0.02
CASD1Q96PB1 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CASD1Q96PB1 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC15.16■□□□□ 0.02
CASD1Q96PB1 AC025186.1-201ENST00000478174 870 ntBASIC15.16■□□□□ 0.02
CASD1Q96PB1 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC15.16■□□□□ 0.02
CASD1Q96PB1 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC15.16■□□□□ 0.02
CASD1Q96PB1 EEF1GP8-201ENST00000506566 1154 ntBASIC15.16■□□□□ 0.02
CASD1Q96PB1 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
CASD1Q96PB1 AC013553.1-201ENST00000560906 267 ntBASIC15.16■□□□□ 0.02
CASD1Q96PB1 TRMT112P3-201ENST00000580149 358 ntBASIC15.16■□□□□ 0.02
CASD1Q96PB1 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CASD1Q96PB1 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC15.16■□□□□ 0.02
CASD1Q96PB1 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CASD1Q96PB1 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CASD1Q96PB1 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CASD1Q96PB1 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CASD1Q96PB1 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.16■□□□□ 0.02
CASD1Q96PB1 DUT-208ENST00000559540 1441 ntTSL 2 BASIC15.16■□□□□ 0.02
CASD1Q96PB1 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC15.16■□□□□ 0.02
CASD1Q96PB1 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CASD1Q96PB1 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CASD1Q96PB1 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.16■□□□□ 0.02
CASD1Q96PB1 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CASD1Q96PB1 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CASD1Q96PB1 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.15■□□□□ 0.02
CASD1Q96PB1 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
CASD1Q96PB1 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CASD1Q96PB1 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CASD1Q96PB1 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CASD1Q96PB1 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CASD1Q96PB1 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CASD1Q96PB1 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CASD1Q96PB1 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.15■□□□□ 0.02
CASD1Q96PB1 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CASD1Q96PB1 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CASD1Q96PB1 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CASD1Q96PB1 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
CASD1Q96PB1 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CASD1Q96PB1 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
CASD1Q96PB1 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CASD1Q96PB1 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CASD1Q96PB1 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CASD1Q96PB1 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CASD1Q96PB1 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CASD1Q96PB1 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CASD1Q96PB1 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC15.15■□□□□ 0.02
CASD1Q96PB1 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CASD1Q96PB1 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC15.15■□□□□ 0.02
CASD1Q96PB1 KRT17P4-201ENST00000429445 819 ntBASIC15.15■□□□□ 0.02
CASD1Q96PB1 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC15.15■□□□□ 0.02
CASD1Q96PB1 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC15.15■□□□□ 0.02
CASD1Q96PB1 TREHP1-201ENST00000531328 465 ntBASIC15.15■□□□□ 0.02
CASD1Q96PB1 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CASD1Q96PB1 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC15.15■□□□□ 0.02
CASD1Q96PB1 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC15.15■□□□□ 0.02
CASD1Q96PB1 COX5A-205ENST00000568517 582 ntTSL 3 BASIC15.15■□□□□ 0.02
CASD1Q96PB1 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC15.15■□□□□ 0.02
CASD1Q96PB1 HKR1-225ENST00000592168 566 ntTSL 4 BASIC15.15■□□□□ 0.02
CASD1Q96PB1 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC15.15■□□□□ 0.02
CASD1Q96PB1 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CASD1Q96PB1 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CASD1Q96PB1 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
CASD1Q96PB1 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CASD1Q96PB1 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CASD1Q96PB1 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CASD1Q96PB1 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CASD1Q96PB1 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CASD1Q96PB1 AC144831.1-201ENST00000573312 2656 ntBASIC15.15■□□□□ 0.02
CASD1Q96PB1 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CASD1Q96PB1 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CASD1Q96PB1 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CASD1Q96PB1 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CASD1Q96PB1 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CASD1Q96PB1 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC15.14■□□□□ 0.01
CASD1Q96PB1 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CASD1Q96PB1 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CASD1Q96PB1 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CASD1Q96PB1 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CASD1Q96PB1 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms