Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 AL928654.5-201ENST00000624831 2501 ntBASIC12.76□□□□□ -0.37
AP3S1Q92572 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S1Q92572 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
AP3S1Q92572 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
AP3S1Q92572 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S1Q92572 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S1Q92572 AL080243.2-201ENST00000418783 582 ntBASIC12.76□□□□□ -0.37
AP3S1Q92572 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.76□□□□□ -0.37
AP3S1Q92572 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S1Q92572 PP7080-204ENST00000510714 601 ntTSL 3 BASIC12.76□□□□□ -0.37
AP3S1Q92572 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC12.76□□□□□ -0.37
AP3S1Q92572 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
AP3S1Q92572 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC12.76□□□□□ -0.37
AP3S1Q92572 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC12.76□□□□□ -0.37
AP3S1Q92572 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.76□□□□□ -0.37
AP3S1Q92572 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.76□□□□□ -0.37
AP3S1Q92572 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
AP3S1Q92572 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.76□□□□□ -0.37
AP3S1Q92572 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S1Q92572 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S1Q92572 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S1Q92572 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
AP3S1Q92572 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
AP3S1Q92572 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S1Q92572 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S1Q92572 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S1Q92572 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
AP3S1Q92572 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.76□□□□□ -0.37
AP3S1Q92572 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S1Q92572 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC12.76□□□□□ -0.37
AP3S1Q92572 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S1Q92572 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.76□□□□□ -0.37
AP3S1Q92572 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S1Q92572 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S1Q92572 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.76□□□□□ -0.37
AP3S1Q92572 AC115284.2-201ENST00000624646 2054 ntBASIC12.76□□□□□ -0.37
AP3S1Q92572 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S1Q92572 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
AP3S1Q92572 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S1Q92572 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S1Q92572 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
AP3S1Q92572 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
AP3S1Q92572 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S1Q92572 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S1Q92572 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
AP3S1Q92572 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S1Q92572 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC12.75□□□□□ -0.37
AP3S1Q92572 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S1Q92572 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S1Q92572 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
AP3S1Q92572 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S1Q92572 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S1Q92572 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S1Q92572 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S1Q92572 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
AP3S1Q92572 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S1Q92572 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S1Q92572 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
AP3S1Q92572 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC12.75□□□□□ -0.37
AP3S1Q92572 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S1Q92572 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S1Q92572 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S1Q92572 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S1Q92572 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC12.75□□□□□ -0.37
AP3S1Q92572 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S1Q92572 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S1Q92572 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC12.75□□□□□ -0.37
AP3S1Q92572 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
AP3S1Q92572 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
AP3S1Q92572 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
AP3S1Q92572 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S1Q92572 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S1Q92572 AC022616.1-201ENST00000518688 554 ntBASIC12.75□□□□□ -0.37
AP3S1Q92572 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
AP3S1Q92572 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.75□□□□□ -0.37
AP3S1Q92572 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.75□□□□□ -0.37
AP3S1Q92572 TPM1-226ENST00000560959 925 ntTSL 2 BASIC12.75□□□□□ -0.37
AP3S1Q92572 AL022313.4-201ENST00000562756 2046 ntBASIC12.75□□□□□ -0.37
AP3S1Q92572 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC12.75□□□□□ -0.37
AP3S1Q92572 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.75□□□□□ -0.37
AP3S1Q92572 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S1Q92572 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC12.75□□□□□ -0.37
AP3S1Q92572 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC12.75□□□□□ -0.37
AP3S1Q92572 GOLGA6L17P-202ENST00000614358 1398 ntBASIC12.75□□□□□ -0.37
AP3S1Q92572 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
AP3S1Q92572 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.75□□□□□ -0.37
AP3S1Q92572 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S1Q92572 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S1Q92572 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S1Q92572 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP3S1Q92572 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC12.75□□□□□ -0.37
AP3S1Q92572 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP3S1Q92572 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP3S1Q92572 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
AP3S1Q92572 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.74□□□□□ -0.37
AP3S1Q92572 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.74□□□□□ -0.37
AP3S1Q92572 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP3S1Q92572 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP3S1Q92572 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP3S1Q92572 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms