Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 AL591499.1-201ENST00000307155 1153 ntBASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 SLC2A11-208ENST00000405847 730 ntTSL 2 BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 U3.41-201ENST00000408711 219 ntBASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 Z84721.1-201ENST00000438841 372 ntBASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 AC022121.1-201ENST00000484584 579 ntBASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 AC068858.1-201ENST00000525114 1239 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 AC104759.1-201ENST00000559109 939 ntBASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 OSGIN1-206ENST00000565123 833 ntTSL 2 BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 AL807742.1-201ENST00000636678 1160 ntTSL 5 BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 SFPQP1-201ENST00000446621 1786 ntBASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
ALMS1Q8TCU4 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 WFDC3-201ENST00000243938 1000 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 FAM86FP-201ENST00000338711 969 ntBASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 VGLL1-201ENST00000370634 1215 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 SDCBP2P1-201ENST00000416115 614 ntBASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 AC093106.1-201ENST00000437271 352 ntBASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 KRT18P15-201ENST00000458108 1291 ntBASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 RN7SL794P-201ENST00000469816 280 ntBASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 AC022447.6-201ENST00000515522 438 ntBASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 TP73-207ENST00000378290 1831 ntTSL 2 BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 AC006001.2-202ENST00000439360 508 ntTSL 3 BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 AC012513.2-201ENST00000441511 1137 ntBASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 AC008267.3-201ENST00000448776 712 ntBASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 AC113398.1-201ENST00000464124 406 ntBASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 IGHV3-11-201ENST00000390601 473 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 RN7SL87P-201ENST00000497657 288 ntBASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 TMEM154-202ENST00000504064 878 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 AC004923.1-201ENST00000527543 776 ntTSL 5 BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 KRT8P25-201ENST00000473150 1456 ntBASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 ADK-205ENST00000539909 1866 ntTSL 2 BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 AL031577.1-201ENST00000339867 399 ntBASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 POLR3DP1-201ENST00000398689 1176 ntBASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 RPL3P9-201ENST00000463217 1183 ntBASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
ALMS1Q8TCU4 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 CD37-203ENST00000426897 1204 ntTSL 2 BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 METTL7AP1-201ENST00000547343 496 ntBASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 CDIPT-AS1-203ENST00000638164 713 ntBASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 PAX6-238ENST00000638755 1161 ntTSL 5 BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 DDC-204ENST00000426377 1700 ntTSL 3 BASIC9.3□□□□□ -0.92
ALMS1Q8TCU4 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms