Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC15.57■□□□□ 0.08
TRIM71Q2Q1W2 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM71Q2Q1W2 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRIM71Q2Q1W2 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 AGPAT5P1-201ENST00000455855 1019 ntBASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 HPX-213ENST00000615166 826 ntTSL 5 BASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 FUCA1P1-201ENST00000374476 1351 ntBASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 AC232323.1-201ENST00000540724 2099 ntBASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
TRIM71Q2Q1W2 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM71Q2Q1W2 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM71Q2Q1W2 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM71Q2Q1W2 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TRIM71Q2Q1W2 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TRIM71Q2Q1W2 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM71Q2Q1W2 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM71Q2Q1W2 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM71Q2Q1W2 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM71Q2Q1W2 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM71Q2Q1W2 PDXDC2P-206ENST00000534700 1315 ntBASIC15.55■□□□□ 0.08
TRIM71Q2Q1W2 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM71Q2Q1W2 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TRIM71Q2Q1W2 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TRIM71Q2Q1W2 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC15.55■□□□□ 0.08
TRIM71Q2Q1W2 KRT17P4-201ENST00000429445 819 ntBASIC15.55■□□□□ 0.08
TRIM71Q2Q1W2 AC092573.1-201ENST00000433054 884 ntBASIC15.55■□□□□ 0.08
TRIM71Q2Q1W2 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC15.55■□□□□ 0.08
TRIM71Q2Q1W2 RN7SL375P-201ENST00000492442 298 ntBASIC15.55■□□□□ 0.08
TRIM71Q2Q1W2 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM71Q2Q1W2 AC022447.6-201ENST00000515522 438 ntBASIC15.55■□□□□ 0.08
TRIM71Q2Q1W2 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM71Q2Q1W2 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM71Q2Q1W2 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
TRIM71Q2Q1W2 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM71Q2Q1W2 CMC2-204ENST00000562713 573 ntTSL 3 BASIC15.55■□□□□ 0.08
TRIM71Q2Q1W2 CMC2-209ENST00000565108 399 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM71Q2Q1W2 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC15.55■□□□□ 0.08
TRIM71Q2Q1W2 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC15.55■□□□□ 0.08
TRIM71Q2Q1W2 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM71Q2Q1W2 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM71Q2Q1W2 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TRIM71Q2Q1W2 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM71Q2Q1W2 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM71Q2Q1W2 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM71Q2Q1W2 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.55■□□□□ 0.08
TRIM71Q2Q1W2 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM71Q2Q1W2 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.55■□□□□ 0.08
TRIM71Q2Q1W2 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM71Q2Q1W2 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM71Q2Q1W2 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRIM71Q2Q1W2 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRIM71Q2Q1W2 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms