Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC11.86□□□□□ -0.51
SPCS3P61009 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC11.86□□□□□ -0.51
SPCS3P61009 AGER-206ENST00000375070 1463 ntTSL 5 BASIC11.86□□□□□ -0.51
SPCS3P61009 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SPCS3P61009 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC11.86□□□□□ -0.51
SPCS3P61009 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
SPCS3P61009 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
SPCS3P61009 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC11.86□□□□□ -0.51
SPCS3P61009 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
SPCS3P61009 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
SPCS3P61009 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
SPCS3P61009 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC11.86□□□□□ -0.51
SPCS3P61009 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SPCS3P61009 DOK4-210ENST00000566936 2851 ntTSL 3 BASIC11.86□□□□□ -0.51
SPCS3P61009 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SPCS3P61009 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
SPCS3P61009 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SPCS3P61009 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SPCS3P61009 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
SPCS3P61009 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SPCS3P61009 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SPCS3P61009 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SPCS3P61009 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC11.86□□□□□ -0.51
SPCS3P61009 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SPCS3P61009 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SPCS3P61009 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SPCS3P61009 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
SPCS3P61009 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
SPCS3P61009 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC11.86□□□□□ -0.51
SPCS3P61009 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
SPCS3P61009 FOS-202ENST00000535987 1402 ntTSL 2 BASIC11.86□□□□□ -0.51
SPCS3P61009 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SPCS3P61009 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
SPCS3P61009 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SPCS3P61009 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
SPCS3P61009 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SPCS3P61009 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC11.85□□□□□ -0.51
SPCS3P61009 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
SPCS3P61009 AL031719.1-201ENST00000623365 2587 ntBASIC11.85□□□□□ -0.51
SPCS3P61009 PCDHA5-203ENST00000614258 4248 ntBASIC11.85□□□□□ -0.51
SPCS3P61009 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SPCS3P61009 MARVELD2-201ENST00000325631 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SPCS3P61009 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC11.85□□□□□ -0.51
SPCS3P61009 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
SPCS3P61009 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
SPCS3P61009 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC11.85□□□□□ -0.51
SPCS3P61009 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SPCS3P61009 HADH-202ENST00000403312 1752 ntTSL 5 BASIC11.85□□□□□ -0.51
SPCS3P61009 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC11.85□□□□□ -0.51
SPCS3P61009 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SPCS3P61009 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SPCS3P61009 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
SPCS3P61009 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SPCS3P61009 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SPCS3P61009 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
SPCS3P61009 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC11.85□□□□□ -0.51
SPCS3P61009 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
SPCS3P61009 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
SPCS3P61009 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
SPCS3P61009 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC11.85□□□□□ -0.51
SPCS3P61009 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
SPCS3P61009 LINC00893-215ENST00000618757 2347 ntTSL 2 BASIC11.85□□□□□ -0.51
SPCS3P61009 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
SPCS3P61009 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SPCS3P61009 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SPCS3P61009 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SPCS3P61009 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
SPCS3P61009 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
SPCS3P61009 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SPCS3P61009 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
SPCS3P61009 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC11.85□□□□□ -0.51
SPCS3P61009 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC11.85□□□□□ -0.51
SPCS3P61009 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC11.85□□□□□ -0.51
SPCS3P61009 AL512638.1-201ENST00000457493 794 ntBASIC11.85□□□□□ -0.51
SPCS3P61009 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC11.85□□□□□ -0.51
SPCS3P61009 AC004890.2-204ENST00000481968 304 ntBASIC11.85□□□□□ -0.51
SPCS3P61009 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SPCS3P61009 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SPCS3P61009 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC11.85□□□□□ -0.51
SPCS3P61009 AC103988.2-201ENST00000561804 725 ntBASIC11.85□□□□□ -0.51
SPCS3P61009 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC11.85□□□□□ -0.51
SPCS3P61009 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
SPCS3P61009 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC11.85□□□□□ -0.51
SPCS3P61009 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC11.85□□□□□ -0.51
SPCS3P61009 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC11.85□□□□□ -0.51
SPCS3P61009 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC11.85□□□□□ -0.51
SPCS3P61009 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SPCS3P61009 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SPCS3P61009 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SPCS3P61009 CAPN13-201ENST00000295055 2683 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
SPCS3P61009 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SPCS3P61009 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
SPCS3P61009 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC11.85□□□□□ -0.51
SPCS3P61009 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SPCS3P61009 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC11.85□□□□□ -0.51
SPCS3P61009 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
SPCS3P61009 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
SPCS3P61009 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SPCS3P61009 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC11.85□□□□□ -0.51
SPCS3P61009 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms