Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFC5P40937 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFC5P40937 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC5P40937 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RFC5P40937 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC5P40937 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RFC5P40937 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC5P40937 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC5P40937 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC5P40937 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC5P40937 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC5P40937 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
RFC5P40937 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.89■□□□□ 0.13
RFC5P40937 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC15.89■□□□□ 0.13
RFC5P40937 AC097359.2-201ENST00000604992 2389 ntBASIC15.89■□□□□ 0.13
RFC5P40937 OR2K2-202ENST00000374428 1038 ntBASIC15.89■□□□□ 0.13
RFC5P40937 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC15.89■□□□□ 0.13
RFC5P40937 MAGEA5-201ENST00000446757 942 ntBASIC15.89■□□□□ 0.13
RFC5P40937 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC15.89■□□□□ 0.13
RFC5P40937 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC15.89■□□□□ 0.13
RFC5P40937 AC114947.1-202ENST00000514136 344 ntBASIC15.89■□□□□ 0.13
RFC5P40937 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
RFC5P40937 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
RFC5P40937 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC15.89■□□□□ 0.13
RFC5P40937 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC15.89■□□□□ 0.13
RFC5P40937 AL133499.1-201ENST00000596207 608 ntBASIC15.89■□□□□ 0.13
RFC5P40937 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC15.89■□□□□ 0.13
RFC5P40937 AC015967.2-201ENST00000624092 234 ntBASIC15.89■□□□□ 0.13
RFC5P40937 AC006435.4-201ENST00000625037 234 ntBASIC15.89■□□□□ 0.13
RFC5P40937 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC15.89■□□□□ 0.13
RFC5P40937 AL356737.1-201ENST00000634391 234 ntBASIC15.89■□□□□ 0.13
RFC5P40937 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RFC5P40937 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RFC5P40937 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.89■□□□□ 0.13
RFC5P40937 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC5P40937 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.89■□□□□ 0.13
RFC5P40937 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.89■□□□□ 0.13
RFC5P40937 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC5P40937 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.89■□□□□ 0.13
RFC5P40937 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC5P40937 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC5P40937 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
RFC5P40937 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC5P40937 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC5P40937 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC15.89■□□□□ 0.13
RFC5P40937 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC5P40937 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
RFC5P40937 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
RFC5P40937 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.89■□□□□ 0.13
RFC5P40937 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFC5P40937 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFC5P40937 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFC5P40937 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFC5P40937 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFC5P40937 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
RFC5P40937 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFC5P40937 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.88■□□□□ 0.13
RFC5P40937 KRT8P31-201ENST00000504812 1408 ntBASIC15.88■□□□□ 0.13
RFC5P40937 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
RFC5P40937 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
RFC5P40937 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.88■□□□□ 0.13
RFC5P40937 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.88■□□□□ 0.13
RFC5P40937 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RFC5P40937 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
RFC5P40937 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFC5P40937 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.88■□□□□ 0.13
RFC5P40937 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFC5P40937 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFC5P40937 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC15.88■□□□□ 0.13
RFC5P40937 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC15.88■□□□□ 0.13
RFC5P40937 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC15.88■□□□□ 0.13
RFC5P40937 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC15.88■□□□□ 0.13
RFC5P40937 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFC5P40937 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFC5P40937 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFC5P40937 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
RFC5P40937 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC15.88■□□□□ 0.13
RFC5P40937 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC15.88■□□□□ 0.13
RFC5P40937 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC15.88■□□□□ 0.13
RFC5P40937 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC15.88■□□□□ 0.13
RFC5P40937 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC15.88■□□□□ 0.13
RFC5P40937 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.88■□□□□ 0.13
RFC5P40937 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.88■□□□□ 0.13
RFC5P40937 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
RFC5P40937 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFC5P40937 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFC5P40937 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFC5P40937 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFC5P40937 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.88■□□□□ 0.13
RFC5P40937 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFC5P40937 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
RFC5P40937 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.88■□□□□ 0.13
RFC5P40937 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
RFC5P40937 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFC5P40937 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
RFC5P40937 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFC5P40937 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
RFC5P40937 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFC5P40937 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFC5P40937 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms