Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 PDXDC2P-206ENST00000534700 1315 ntBASIC17.98■□□□□ 0.47
COL15A1P39059 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC17.98■□□□□ 0.47
COL15A1P39059 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
COL15A1P39059 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL15A1P39059 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL15A1P39059 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL15A1P39059 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL15A1P39059 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL15A1P39059 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL15A1P39059 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL15A1P39059 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
COL15A1P39059 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
COL15A1P39059 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL15A1P39059 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL15A1P39059 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.97■□□□□ 0.47
COL15A1P39059 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL15A1P39059 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL15A1P39059 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL15A1P39059 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
COL15A1P39059 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
COL15A1P39059 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.97■□□□□ 0.47
COL15A1P39059 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
COL15A1P39059 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL15A1P39059 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL15A1P39059 KRT8P43-201ENST00000406052 1458 ntBASIC17.97■□□□□ 0.47
COL15A1P39059 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL15A1P39059 AC008026.2-201ENST00000495438 348 ntBASIC17.97■□□□□ 0.47
COL15A1P39059 SLC25A15P3-201ENST00000505530 290 ntBASIC17.97■□□□□ 0.47
COL15A1P39059 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC17.97■□□□□ 0.47
COL15A1P39059 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC17.97■□□□□ 0.47
COL15A1P39059 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL15A1P39059 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC17.97■□□□□ 0.47
COL15A1P39059 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC17.97■□□□□ 0.47
COL15A1P39059 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
COL15A1P39059 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL15A1P39059 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC17.97■□□□□ 0.47
COL15A1P39059 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL15A1P39059 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL15A1P39059 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC17.97■□□□□ 0.47
COL15A1P39059 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC17.96■□□□□ 0.47
COL15A1P39059 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL15A1P39059 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL15A1P39059 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
COL15A1P39059 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC17.96■□□□□ 0.47
COL15A1P39059 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
COL15A1P39059 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL15A1P39059 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC17.96■□□□□ 0.47
COL15A1P39059 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC17.96■□□□□ 0.47
COL15A1P39059 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL15A1P39059 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL15A1P39059 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL15A1P39059 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
COL15A1P39059 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL15A1P39059 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC17.96■□□□□ 0.47
COL15A1P39059 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
COL15A1P39059 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL15A1P39059 FAM86KP-201ENST00000509817 987 ntBASIC17.96■□□□□ 0.47
COL15A1P39059 RN7SKP155-201ENST00000516031 288 ntBASIC17.96■□□□□ 0.47
COL15A1P39059 KRT18P37-201ENST00000520711 1282 ntBASIC17.96■□□□□ 0.47
COL15A1P39059 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL15A1P39059 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC17.96■□□□□ 0.47
COL15A1P39059 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC17.96■□□□□ 0.47
COL15A1P39059 GOLGA2P7-209ENST00000560408 745 ntBASIC17.96■□□□□ 0.47
COL15A1P39059 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC17.96■□□□□ 0.47
COL15A1P39059 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC17.96■□□□□ 0.47
COL15A1P39059 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL15A1P39059 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL15A1P39059 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL15A1P39059 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
COL15A1P39059 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL15A1P39059 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL15A1P39059 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.96■□□□□ 0.47
COL15A1P39059 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL15A1P39059 ADK-205ENST00000539909 1866 ntTSL 2 BASIC17.96■□□□□ 0.47
COL15A1P39059 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC17.96■□□□□ 0.47
COL15A1P39059 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC17.96■□□□□ 0.47
COL15A1P39059 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL15A1P39059 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL15A1P39059 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
COL15A1P39059 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
COL15A1P39059 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
COL15A1P39059 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC17.96■□□□□ 0.46
COL15A1P39059 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.96■□□□□ 0.46
COL15A1P39059 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC17.95■□□□□ 0.46
COL15A1P39059 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL15A1P39059 SHMT1P1-201ENST00000419974 1312 ntBASIC17.95■□□□□ 0.46
COL15A1P39059 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC17.95■□□□□ 0.46
COL15A1P39059 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL15A1P39059 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL15A1P39059 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL15A1P39059 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC17.95■□□□□ 0.46
COL15A1P39059 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC17.95■□□□□ 0.46
COL15A1P39059 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC17.95■□□□□ 0.46
COL15A1P39059 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC17.95■□□□□ 0.46
COL15A1P39059 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC17.95■□□□□ 0.46
COL15A1P39059 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC17.95■□□□□ 0.46
COL15A1P39059 PRSS3P1-201ENST00000503996 742 ntBASIC17.95■□□□□ 0.46
COL15A1P39059 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC17.95■□□□□ 0.46
COL15A1P39059 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC17.95■□□□□ 0.46
COL15A1P39059 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms