Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.14□□□□□ -0.47
LMO1P25800 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC12.14□□□□□ -0.47
LMO1P25800 AC104989.1-201ENST00000519711 778 ntBASIC12.14□□□□□ -0.47
LMO1P25800 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.14□□□□□ -0.47
LMO1P25800 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC12.14□□□□□ -0.47
LMO1P25800 HILS1-202ENST00000545329 423 ntBASIC12.14□□□□□ -0.47
LMO1P25800 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.14□□□□□ -0.47
LMO1P25800 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC12.14□□□□□ -0.47
LMO1P25800 MIR6805-201ENST00000615055 62 ntBASIC12.14□□□□□ -0.47
LMO1P25800 MIR6799-201ENST00000620297 69 ntBASIC12.14□□□□□ -0.47
LMO1P25800 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
LMO1P25800 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
LMO1P25800 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC12.14□□□□□ -0.47
LMO1P25800 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
LMO1P25800 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
LMO1P25800 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LMO1P25800 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LMO1P25800 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.14□□□□□ -0.47
LMO1P25800 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LMO1P25800 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LMO1P25800 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC12.14□□□□□ -0.47
LMO1P25800 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
LMO1P25800 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.14□□□□□ -0.47
LMO1P25800 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
LMO1P25800 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LMO1P25800 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LMO1P25800 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LMO1P25800 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.13□□□□□ -0.47
LMO1P25800 AL008718.2-201ENST00000609206 1313 ntBASIC12.13□□□□□ -0.47
LMO1P25800 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
LMO1P25800 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LMO1P25800 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
LMO1P25800 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LMO1P25800 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LMO1P25800 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
LMO1P25800 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
LMO1P25800 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
LMO1P25800 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LMO1P25800 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LMO1P25800 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.13□□□□□ -0.47
LMO1P25800 AC019294.4-201ENST00000561777 2905 ntBASIC12.13□□□□□ -0.47
LMO1P25800 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LMO1P25800 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LMO1P25800 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
LMO1P25800 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LMO1P25800 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LMO1P25800 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LMO1P25800 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
LMO1P25800 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LMO1P25800 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LMO1P25800 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LMO1P25800 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LMO1P25800 AC012441.2-201ENST00000444843 739 ntBASIC12.13□□□□□ -0.47
LMO1P25800 HNRNPA1P36-201ENST00000521313 955 ntBASIC12.13□□□□□ -0.47
LMO1P25800 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC12.13□□□□□ -0.47
LMO1P25800 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LMO1P25800 RBM8B-201ENST00000555532 525 ntBASIC12.13□□□□□ -0.47
LMO1P25800 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC12.13□□□□□ -0.47
LMO1P25800 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LMO1P25800 HNRNPA1P48-202ENST00000565308 961 ntBASIC12.13□□□□□ -0.47
LMO1P25800 MIR4783-201ENST00000580343 82 ntBASIC12.13□□□□□ -0.47
LMO1P25800 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
LMO1P25800 AC009884.2-201ENST00000603110 324 ntBASIC12.13□□□□□ -0.47
LMO1P25800 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.13□□□□□ -0.47
LMO1P25800 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.13□□□□□ -0.47
LMO1P25800 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.13□□□□□ -0.47
LMO1P25800 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LMO1P25800 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC12.13□□□□□ -0.47
LMO1P25800 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LMO1P25800 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.13□□□□□ -0.47
LMO1P25800 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LMO1P25800 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.13□□□□□ -0.47
LMO1P25800 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
LMO1P25800 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LMO1P25800 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LMO1P25800 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LMO1P25800 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.13□□□□□ -0.47
LMO1P25800 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
LMO1P25800 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
LMO1P25800 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LMO1P25800 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.13□□□□□ -0.47
LMO1P25800 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LMO1P25800 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC12.13□□□□□ -0.47
LMO1P25800 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LMO1P25800 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LMO1P25800 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LMO1P25800 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LMO1P25800 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
LMO1P25800 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.13□□□□□ -0.47
LMO1P25800 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LMO1P25800 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LMO1P25800 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LMO1P25800 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LMO1P25800 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
LMO1P25800 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LMO1P25800 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
LMO1P25800 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LMO1P25800 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.12□□□□□ -0.47
LMO1P25800 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.12□□□□□ -0.47
LMO1P25800 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms