Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHGAP10645 GRPEL2P1-201ENST00000453145 339 ntBASIC20.57■□□□□ 0.88
CHGAP10645 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHGAP10645 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CHGAP10645 VENTXP3-201ENST00000546480 773 ntBASIC20.57■□□□□ 0.88
CHGAP10645 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHGAP10645 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC20.57■□□□□ 0.88
CHGAP10645 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CHGAP10645 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHGAP10645 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHGAP10645 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC20.57■□□□□ 0.88
CHGAP10645 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC20.57■□□□□ 0.88
CHGAP10645 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHGAP10645 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHGAP10645 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC20.57■□□□□ 0.88
CHGAP10645 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHGAP10645 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC20.56■□□□□ 0.88
CHGAP10645 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC20.56■□□□□ 0.88
CHGAP10645 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHGAP10645 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHGAP10645 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHGAP10645 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHGAP10645 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC20.56■□□□□ 0.88
CHGAP10645 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC20.56■□□□□ 0.88
CHGAP10645 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHGAP10645 FAU-202ENST00000434372 533 ntTSL 2 BASIC20.56■□□□□ 0.88
CHGAP10645 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
CHGAP10645 GOLGA2P7-209ENST00000560408 745 ntBASIC20.56■□□□□ 0.88
CHGAP10645 TRMT112P3-201ENST00000580149 358 ntBASIC20.56■□□□□ 0.88
CHGAP10645 AP005264.6-204ENST00000588436 719 ntBASIC20.56■□□□□ 0.88
CHGAP10645 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHGAP10645 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHGAP10645 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHGAP10645 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHGAP10645 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHGAP10645 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC20.56■□□□□ 0.88
CHGAP10645 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHGAP10645 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CHGAP10645 USP35-204ENST00000530267 2419 ntTSL 2 BASIC20.56■□□□□ 0.88
CHGAP10645 MSANTD2P1-201ENST00000445341 1368 ntBASIC20.56■□□□□ 0.88
CHGAP10645 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHGAP10645 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
CHGAP10645 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHGAP10645 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHGAP10645 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHGAP10645 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHGAP10645 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHGAP10645 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHGAP10645 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CHGAP10645 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHGAP10645 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC20.55■□□□□ 0.88
CHGAP10645 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC20.55■□□□□ 0.88
CHGAP10645 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
CHGAP10645 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CHGAP10645 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHGAP10645 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC20.55■□□□□ 0.88
CHGAP10645 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHGAP10645 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHGAP10645 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHGAP10645 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHGAP10645 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHGAP10645 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHGAP10645 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHGAP10645 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHGAP10645 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHGAP10645 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC20.55■□□□□ 0.88
CHGAP10645 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC20.55■□□□□ 0.88
CHGAP10645 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHGAP10645 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHGAP10645 CHCHD2P2-201ENST00000503744 321 ntBASIC20.55■□□□□ 0.88
CHGAP10645 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC20.55■□□□□ 0.88
CHGAP10645 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC20.55■□□□□ 0.88
CHGAP10645 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC20.55■□□□□ 0.88
CHGAP10645 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC20.55■□□□□ 0.88
CHGAP10645 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CHGAP10645 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHGAP10645 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHGAP10645 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHGAP10645 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHGAP10645 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHGAP10645 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHGAP10645 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CHGAP10645 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHGAP10645 TCAF2P1-201ENST00000291129 2421 ntBASIC20.55■□□□□ 0.88
CHGAP10645 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHGAP10645 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CHGAP10645 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHGAP10645 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHGAP10645 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHGAP10645 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHGAP10645 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC20.54■□□□□ 0.88
CHGAP10645 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHGAP10645 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHGAP10645 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHGAP10645 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC20.54■□□□□ 0.88
CHGAP10645 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHGAP10645 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CHGAP10645 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHGAP10645 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHGAP10645 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms