Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.08□□□□□ -0.16
PKP4Q99569 AP000346.4-201ENST00000614827 381 ntBASIC14.08□□□□□ -0.16
PKP4Q99569 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.08□□□□□ -0.16
PKP4Q99569 AC004923.1-202ENST00000642106 209 ntBASIC14.08□□□□□ -0.16
PKP4Q99569 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PKP4Q99569 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PKP4Q99569 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PKP4Q99569 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
PKP4Q99569 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PKP4Q99569 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PKP4Q99569 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
PKP4Q99569 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PKP4Q99569 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
PKP4Q99569 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PKP4Q99569 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PKP4Q99569 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.07□□□□□ -0.16
PKP4Q99569 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PKP4Q99569 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
PKP4Q99569 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
PKP4Q99569 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PKP4Q99569 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
PKP4Q99569 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PKP4Q99569 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
PKP4Q99569 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PKP4Q99569 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PKP4Q99569 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PKP4Q99569 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PKP4Q99569 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PKP4Q99569 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PKP4Q99569 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.07□□□□□ -0.16
PKP4Q99569 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
PKP4Q99569 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PKP4Q99569 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PKP4Q99569 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PKP4Q99569 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PKP4Q99569 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PKP4Q99569 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PKP4Q99569 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
PKP4Q99569 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PKP4Q99569 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
PKP4Q99569 KRT18P36-201ENST00000411618 1276 ntBASIC14.07□□□□□ -0.16
PKP4Q99569 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.07□□□□□ -0.16
PKP4Q99569 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.07□□□□□ -0.16
PKP4Q99569 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
PKP4Q99569 PFN1P12-201ENST00000455938 534 ntBASIC14.07□□□□□ -0.16
PKP4Q99569 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.07□□□□□ -0.16
PKP4Q99569 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.07□□□□□ -0.16
PKP4Q99569 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.07□□□□□ -0.16
PKP4Q99569 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.07□□□□□ -0.16
PKP4Q99569 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.07□□□□□ -0.16
PKP4Q99569 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.07□□□□□ -0.16
PKP4Q99569 RN7SL219P-201ENST00000582872 296 ntBASIC14.07□□□□□ -0.16
PKP4Q99569 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.07□□□□□ -0.16
PKP4Q99569 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.07□□□□□ -0.16
PKP4Q99569 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PKP4Q99569 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PKP4Q99569 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.07□□□□□ -0.16
PKP4Q99569 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PKP4Q99569 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
PKP4Q99569 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
PKP4Q99569 AL008638.5-201ENST00000623814 1298 ntBASIC14.07□□□□□ -0.16
PKP4Q99569 AC068587.8-201ENST00000641239 219 ntBASIC14.07□□□□□ -0.16
PKP4Q99569 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PKP4Q99569 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.07□□□□□ -0.16
PKP4Q99569 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PKP4Q99569 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.07□□□□□ -0.16
PKP4Q99569 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PKP4Q99569 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PKP4Q99569 TUBB8P4-201ENST00000511806 1324 ntBASIC14.07□□□□□ -0.16
PKP4Q99569 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.07□□□□□ -0.16
PKP4Q99569 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
PKP4Q99569 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
PKP4Q99569 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PKP4Q99569 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PKP4Q99569 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PKP4Q99569 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.07□□□□□ -0.16
PKP4Q99569 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PKP4Q99569 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PKP4Q99569 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PKP4Q99569 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PKP4Q99569 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
PKP4Q99569 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PKP4Q99569 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PKP4Q99569 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PKP4Q99569 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PKP4Q99569 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PKP4Q99569 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PKP4Q99569 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PKP4Q99569 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.06□□□□□ -0.16
PKP4Q99569 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.06□□□□□ -0.16
PKP4Q99569 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PKP4Q99569 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
PKP4Q99569 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.06□□□□□ -0.16
PKP4Q99569 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PKP4Q99569 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PKP4Q99569 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PKP4Q99569 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PKP4Q99569 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
PKP4Q99569 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PKP4Q99569 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms