Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 TLE1P1-201ENST00000422965 589 ntBASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 ADH5P3-201ENST00000433842 1137 ntBASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 SERBP1P3-201ENST00000459980 809 ntBASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 CD63-204ENST00000546939 779 ntTSL 3 BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 BAP1-211ENST00000615113 489 ntBASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SMIM11BQ8TCY0 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 AL021155.1-201ENST00000438808 2637 ntBASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 GOLGA8EP-201ENST00000530246 1959 ntBASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 BEX3-201ENST00000361298 921 ntTSL 2 BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 AC007967.2-201ENST00000432613 625 ntBASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 TIMM8BP1-201ENST00000452384 211 ntBASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 AC069335.1-201ENST00000489972 472 ntBASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 KLK3-207ENST00000595952 969 ntTSL 3 BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 PER1-202ENST00000354903 3115 ntTSL 2 BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SMIM11BQ8TCY0 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC9.41□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms