Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 ST13P19-201ENST00000442505 1124 ntBASIC11.95□□□□□ -0.5
CCDC168Q8NDH2 AC005740.1-201ENST00000515639 522 ntBASIC11.95□□□□□ -0.5
CCDC168Q8NDH2 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CCDC168Q8NDH2 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC11.95□□□□□ -0.5
CCDC168Q8NDH2 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC11.95□□□□□ -0.5
CCDC168Q8NDH2 AC016582.2-202ENST00000587765 1094 ntBASIC11.95□□□□□ -0.5
CCDC168Q8NDH2 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC11.95□□□□□ -0.5
CCDC168Q8NDH2 BLK-205ENST00000529894 2017 ntTSL 5 BASIC11.95□□□□□ -0.5
CCDC168Q8NDH2 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CCDC168Q8NDH2 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CCDC168Q8NDH2 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 AL590440.2-201ENST00000641973 1595 ntBASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 PLA2G2A-201ENST00000375111 970 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 HNRNPA1P2-207ENST00000432375 960 ntBASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 TREX1-203ENST00000456089 629 ntTSL 3 BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 AC008021.1-201ENST00000474180 414 ntBASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 AC145285.5-201ENST00000562217 361 ntBASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 INO80E-209ENST00000567254 625 ntTSL 2 BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 EMP3-204ENST00000596315 761 ntTSL 2 BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 AC007952.5-201ENST00000572818 1486 ntBASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 KLF17P1-201ENST00000547105 1126 ntBASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 CDC37P2-201ENST00000562287 1029 ntBASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
CCDC168Q8NDH2 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC11.93□□□□□ -0.5
CCDC168Q8NDH2 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC11.93□□□□□ -0.5
CCDC168Q8NDH2 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CCDC168Q8NDH2 FAM226B-201ENST00000602508 1490 ntBASIC11.93□□□□□ -0.5
CCDC168Q8NDH2 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC11.93□□□□□ -0.5
CCDC168Q8NDH2 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
CCDC168Q8NDH2 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC11.93□□□□□ -0.5
CCDC168Q8NDH2 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC11.93□□□□□ -0.5
CCDC168Q8NDH2 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CCDC168Q8NDH2 PCDHA3-202ENST00000532566 4594 ntBASIC11.93□□□□□ -0.5
CCDC168Q8NDH2 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CCDC168Q8NDH2 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC11.93□□□□□ -0.5
CCDC168Q8NDH2 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CCDC168Q8NDH2 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CCDC168Q8NDH2 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CCDC168Q8NDH2 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
CCDC168Q8NDH2 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CCDC168Q8NDH2 SIRPB3P-201ENST00000340424 1216 ntBASIC11.93□□□□□ -0.5
CCDC168Q8NDH2 AP000354.1-201ENST00000396982 456 ntBASIC11.93□□□□□ -0.5
CCDC168Q8NDH2 ABCD1P4-201ENST00000399687 604 ntBASIC11.93□□□□□ -0.5
CCDC168Q8NDH2 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CCDC168Q8NDH2 AL359092.2-201ENST00000423330 585 ntBASIC11.93□□□□□ -0.5
CCDC168Q8NDH2 RPSAP12-201ENST00000435879 888 ntBASIC11.93□□□□□ -0.5
CCDC168Q8NDH2 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC11.93□□□□□ -0.5
CCDC168Q8NDH2 DPY19L2P4-201ENST00000479881 442 ntBASIC11.93□□□□□ -0.5
CCDC168Q8NDH2 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC11.93□□□□□ -0.5
CCDC168Q8NDH2 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms