Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 AL109936.8-201ENST00000641772 604 ntBASIC13.22□□□□□ -0.29
RBM48Q5RL73 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RBM48Q5RL73 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RBM48Q5RL73 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC13.22□□□□□ -0.29
RBM48Q5RL73 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RBM48Q5RL73 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RBM48Q5RL73 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RBM48Q5RL73 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
RBM48Q5RL73 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
RBM48Q5RL73 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RBM48Q5RL73 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RBM48Q5RL73 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RBM48Q5RL73 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RBM48Q5RL73 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC13.22□□□□□ -0.29
RBM48Q5RL73 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RBM48Q5RL73 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RBM48Q5RL73 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
RBM48Q5RL73 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
RBM48Q5RL73 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC13.22□□□□□ -0.29
RBM48Q5RL73 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
RBM48Q5RL73 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
RBM48Q5RL73 TNRC18P1-201ENST00000502875 3650 ntBASIC13.21□□□□□ -0.29
RBM48Q5RL73 C2-209ENST00000452323 1999 ntTSL 2 BASIC13.21□□□□□ -0.29
RBM48Q5RL73 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC13.21□□□□□ -0.29
RBM48Q5RL73 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RBM48Q5RL73 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RBM48Q5RL73 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RBM48Q5RL73 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.21□□□□□ -0.29
RBM48Q5RL73 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RBM48Q5RL73 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RBM48Q5RL73 AC110048.1-201ENST00000604293 2157 ntBASIC13.21□□□□□ -0.29
RBM48Q5RL73 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
RBM48Q5RL73 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC13.21□□□□□ -0.29
RBM48Q5RL73 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC13.21□□□□□ -0.29
RBM48Q5RL73 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RBM48Q5RL73 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RBM48Q5RL73 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.21□□□□□ -0.29
RBM48Q5RL73 AL590440.2-201ENST00000641973 1595 ntBASIC13.21□□□□□ -0.29
RBM48Q5RL73 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
RBM48Q5RL73 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC13.21□□□□□ -0.29
RBM48Q5RL73 AC002350.2-201ENST00000623894 1828 ntBASIC13.21□□□□□ -0.29
RBM48Q5RL73 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RBM48Q5RL73 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RBM48Q5RL73 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RBM48Q5RL73 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RBM48Q5RL73 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.21□□□□□ -0.29
RBM48Q5RL73 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RBM48Q5RL73 AL161932.2-201ENST00000435436 679 ntBASIC13.21□□□□□ -0.29
RBM48Q5RL73 TPM4P1-201ENST00000436100 807 ntBASIC13.21□□□□□ -0.29
RBM48Q5RL73 MKNK2P1-201ENST00000437526 628 ntBASIC13.21□□□□□ -0.29
RBM48Q5RL73 RBPMS2P1-201ENST00000437762 623 ntBASIC13.21□□□□□ -0.29
RBM48Q5RL73 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RBM48Q5RL73 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.21□□□□□ -0.29
RBM48Q5RL73 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.21□□□□□ -0.29
RBM48Q5RL73 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RBM48Q5RL73 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RBM48Q5RL73 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.21□□□□□ -0.29
RBM48Q5RL73 AC026410.3-201ENST00000514280 936 ntBASIC13.21□□□□□ -0.29
RBM48Q5RL73 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.21□□□□□ -0.29
RBM48Q5RL73 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.21□□□□□ -0.29
RBM48Q5RL73 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC13.21□□□□□ -0.29
RBM48Q5RL73 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC13.21□□□□□ -0.29
RBM48Q5RL73 AC022145.2-201ENST00000598203 171 ntBASIC13.21□□□□□ -0.29
RBM48Q5RL73 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RBM48Q5RL73 CR392039.2-201ENST00000623182 509 ntBASIC13.21□□□□□ -0.29
RBM48Q5RL73 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RBM48Q5RL73 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
RBM48Q5RL73 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
RBM48Q5RL73 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
RBM48Q5RL73 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RBM48Q5RL73 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.21□□□□□ -0.3
RBM48Q5RL73 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC13.21□□□□□ -0.3
RBM48Q5RL73 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
RBM48Q5RL73 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
RBM48Q5RL73 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RBM48Q5RL73 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
RBM48Q5RL73 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RBM48Q5RL73 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
RBM48Q5RL73 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
RBM48Q5RL73 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RBM48Q5RL73 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
RBM48Q5RL73 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
RBM48Q5RL73 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RBM48Q5RL73 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RBM48Q5RL73 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RBM48Q5RL73 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RBM48Q5RL73 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RBM48Q5RL73 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RBM48Q5RL73 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
RBM48Q5RL73 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RBM48Q5RL73 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RBM48Q5RL73 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RBM48Q5RL73 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC13.2□□□□□ -0.3
RBM48Q5RL73 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RBM48Q5RL73 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RBM48Q5RL73 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RBM48Q5RL73 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.2□□□□□ -0.3
RBM48Q5RL73 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.2□□□□□ -0.3
RBM48Q5RL73 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
RBM48Q5RL73 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms