Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.69□□□□□ -0.38
SFTPBP07988 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.69□□□□□ -0.38
SFTPBP07988 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
SFTPBP07988 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SFTPBP07988 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.69□□□□□ -0.38
SFTPBP07988 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.69□□□□□ -0.38
SFTPBP07988 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SFTPBP07988 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SFTPBP07988 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SFTPBP07988 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SFTPBP07988 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC12.69□□□□□ -0.38
SFTPBP07988 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SFTPBP07988 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SFTPBP07988 ACTBP8-201ENST00000403258 1108 ntBASIC12.69□□□□□ -0.38
SFTPBP07988 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.69□□□□□ -0.38
SFTPBP07988 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.69□□□□□ -0.38
SFTPBP07988 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.69□□□□□ -0.38
SFTPBP07988 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12.69□□□□□ -0.38
SFTPBP07988 ACTG1P3-201ENST00000431775 1114 ntBASIC12.69□□□□□ -0.38
SFTPBP07988 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC12.69□□□□□ -0.38
SFTPBP07988 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.69□□□□□ -0.38
SFTPBP07988 AC234783.1-201ENST00000441761 496 ntBASIC12.69□□□□□ -0.38
SFTPBP07988 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SFTPBP07988 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
SFTPBP07988 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.69□□□□□ -0.38
SFTPBP07988 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC12.69□□□□□ -0.38
SFTPBP07988 ORC6-206ENST00000568364 888 ntTSL 5 BASIC12.69□□□□□ -0.38
SFTPBP07988 AC106886.1-201ENST00000568660 600 ntBASIC12.69□□□□□ -0.38
SFTPBP07988 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
SFTPBP07988 CLUHP6-201ENST00000580789 941 ntBASIC12.69□□□□□ -0.38
SFTPBP07988 AC233724.13-201ENST00000598383 410 ntBASIC12.69□□□□□ -0.38
SFTPBP07988 AL359881.2-201ENST00000602973 570 ntBASIC12.69□□□□□ -0.38
SFTPBP07988 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.69□□□□□ -0.38
SFTPBP07988 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
SFTPBP07988 AC003102.2-201ENST00000589195 1469 ntBASIC12.69□□□□□ -0.38
SFTPBP07988 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.69□□□□□ -0.38
SFTPBP07988 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SFTPBP07988 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SFTPBP07988 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SFTPBP07988 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SFTPBP07988 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.69□□□□□ -0.38
SFTPBP07988 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SFTPBP07988 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SFTPBP07988 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.69□□□□□ -0.38
SFTPBP07988 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.69□□□□□ -0.38
SFTPBP07988 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SFTPBP07988 USP47-202ENST00000339865 7775 ntTSL 2 BASIC12.69□□□□□ -0.38
SFTPBP07988 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SFTPBP07988 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
SFTPBP07988 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
SFTPBP07988 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SFTPBP07988 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.69□□□□□ -0.38
SFTPBP07988 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SFTPBP07988 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SFTPBP07988 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.69□□□□□ -0.38
SFTPBP07988 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SFTPBP07988 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.69□□□□□ -0.38
SFTPBP07988 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SFTPBP07988 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.68□□□□□ -0.38
SFTPBP07988 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SFTPBP07988 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SFTPBP07988 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.68□□□□□ -0.38
SFTPBP07988 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SFTPBP07988 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SFTPBP07988 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
SFTPBP07988 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.68□□□□□ -0.38
SFTPBP07988 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SFTPBP07988 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
SFTPBP07988 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SFTPBP07988 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
SFTPBP07988 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
SFTPBP07988 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SFTPBP07988 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SFTPBP07988 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SFTPBP07988 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
SFTPBP07988 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SFTPBP07988 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.68□□□□□ -0.38
SFTPBP07988 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
SFTPBP07988 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SFTPBP07988 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.68□□□□□ -0.38
SFTPBP07988 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SFTPBP07988 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SFTPBP07988 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SFTPBP07988 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SFTPBP07988 AC073957.3-201ENST00000609998 6758 ntBASIC12.68□□□□□ -0.38
SFTPBP07988 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.68□□□□□ -0.38
SFTPBP07988 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.68□□□□□ -0.38
SFTPBP07988 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SFTPBP07988 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SFTPBP07988 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC12.68□□□□□ -0.38
SFTPBP07988 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.68□□□□□ -0.38
SFTPBP07988 MIR658-201ENST00000385210 100 ntBASIC12.68□□□□□ -0.38
SFTPBP07988 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
SFTPBP07988 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
SFTPBP07988 AC007969.1-201ENST00000433675 447 ntBASIC12.68□□□□□ -0.38
SFTPBP07988 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SFTPBP07988 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC12.68□□□□□ -0.38
SFTPBP07988 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC12.68□□□□□ -0.38
SFTPBP07988 BCRP2-202ENST00000447763 634 ntBASIC12.68□□□□□ -0.38
SFTPBP07988 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms