Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC18.52■□□□□ 0.55
LTN1O94822 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC18.52■□□□□ 0.55
LTN1O94822 AC090510.3-201ENST00000615831 821 ntBASIC18.52■□□□□ 0.55
LTN1O94822 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC18.52■□□□□ 0.55
LTN1O94822 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
LTN1O94822 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC18.52■□□□□ 0.55
LTN1O94822 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LTN1O94822 TKT-201ENST00000296289 1931 ntTSL 5 BASIC18.52■□□□□ 0.55
LTN1O94822 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
LTN1O94822 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
LTN1O94822 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LTN1O94822 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LTN1O94822 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LTN1O94822 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
LTN1O94822 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
LTN1O94822 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LTN1O94822 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LTN1O94822 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LTN1O94822 AL157823.1-201ENST00000403727 628 ntBASIC18.51■□□□□ 0.55
LTN1O94822 PGAM1P11-201ENST00000416729 680 ntBASIC18.51■□□□□ 0.55
LTN1O94822 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC18.51■□□□□ 0.55
LTN1O94822 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC18.51■□□□□ 0.55
LTN1O94822 AP001527.2-201ENST00000614441 631 ntBASIC18.51■□□□□ 0.55
LTN1O94822 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LTN1O94822 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LTN1O94822 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LTN1O94822 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LTN1O94822 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC18.51■□□□□ 0.55
LTN1O94822 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LTN1O94822 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
LTN1O94822 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC18.51■□□□□ 0.55
LTN1O94822 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LTN1O94822 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LTN1O94822 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LTN1O94822 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
LTN1O94822 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC18.5■□□□□ 0.55
LTN1O94822 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC18.5■□□□□ 0.55
LTN1O94822 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LTN1O94822 AC064850.1-201ENST00000413279 1398 ntBASIC18.5■□□□□ 0.55
LTN1O94822 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LTN1O94822 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LTN1O94822 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LTN1O94822 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LTN1O94822 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LTN1O94822 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LTN1O94822 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LTN1O94822 TPO-203ENST00000346956 2923 ntTSL 5 BASIC18.5■□□□□ 0.55
LTN1O94822 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LTN1O94822 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC18.5■□□□□ 0.55
LTN1O94822 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
LTN1O94822 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC18.5■□□□□ 0.55
LTN1O94822 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LTN1O94822 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
LTN1O94822 AC093462.1-201ENST00000621167 1683 ntBASIC18.5■□□□□ 0.55
LTN1O94822 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LTN1O94822 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LTN1O94822 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
LTN1O94822 SNU13-204ENST00000402458 462 ntTSL 3 BASIC18.5■□□□□ 0.55
LTN1O94822 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC18.5■□□□□ 0.55
LTN1O94822 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LTN1O94822 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LTN1O94822 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LTN1O94822 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC18.5■□□□□ 0.55
LTN1O94822 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC18.5■□□□□ 0.55
LTN1O94822 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC18.5■□□□□ 0.55
LTN1O94822 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LTN1O94822 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LTN1O94822 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC18.49■□□□□ 0.55
LTN1O94822 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LTN1O94822 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
LTN1O94822 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LTN1O94822 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
LTN1O94822 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
LTN1O94822 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC18.49■□□□□ 0.55
LTN1O94822 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC18.49■□□□□ 0.55
LTN1O94822 AC008620.2-201ENST00000510294 1569 ntBASIC18.49■□□□□ 0.55
LTN1O94822 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC18.49■□□□□ 0.55
LTN1O94822 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LTN1O94822 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LTN1O94822 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
LTN1O94822 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
LTN1O94822 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
LTN1O94822 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC18.49■□□□□ 0.55
LTN1O94822 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC18.49■□□□□ 0.55
LTN1O94822 EEF1DP5-201ENST00000431410 772 ntBASIC18.49■□□□□ 0.55
LTN1O94822 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC18.49■□□□□ 0.55
LTN1O94822 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC18.49■□□□□ 0.55
LTN1O94822 CASP3-205ENST00000517513 964 ntTSL 5 BASIC18.49■□□□□ 0.55
LTN1O94822 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC18.49■□□□□ 0.55
LTN1O94822 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC18.49■□□□□ 0.55
LTN1O94822 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC18.49■□□□□ 0.55
LTN1O94822 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LTN1O94822 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC18.49■□□□□ 0.55
LTN1O94822 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LTN1O94822 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LTN1O94822 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LTN1O94822 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LTN1O94822 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LTN1O94822 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LTN1O94822 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms