Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
TRIM3O75382 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM3O75382 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM3O75382 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM3O75382 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TRIM3O75382 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM3O75382 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM3O75382 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRIM3O75382 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
TRIM3O75382 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TRIM3O75382 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.58□□□□□ -0.23
TRIM3O75382 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.58□□□□□ -0.23
TRIM3O75382 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.58□□□□□ -0.23
TRIM3O75382 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TRIM3O75382 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.58□□□□□ -0.23
TRIM3O75382 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.58□□□□□ -0.23
TRIM3O75382 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.58□□□□□ -0.23
TRIM3O75382 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
TRIM3O75382 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
TRIM3O75382 DMBT1P1-203ENST00000636837 4628 ntBASIC13.58□□□□□ -0.24
TRIM3O75382 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM3O75382 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.58□□□□□ -0.24
TRIM3O75382 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM3O75382 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM3O75382 AC089987.1-201ENST00000551654 2209 ntBASIC13.58□□□□□ -0.24
TRIM3O75382 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM3O75382 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.58□□□□□ -0.24
TRIM3O75382 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.58□□□□□ -0.24
TRIM3O75382 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
TRIM3O75382 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
TRIM3O75382 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.58□□□□□ -0.24
TRIM3O75382 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM3O75382 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM3O75382 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
TRIM3O75382 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.58□□□□□ -0.24
TRIM3O75382 MIR663B-201ENST00000408361 115 ntBASIC13.58□□□□□ -0.24
TRIM3O75382 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.58□□□□□ -0.24
TRIM3O75382 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.58□□□□□ -0.24
TRIM3O75382 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.58□□□□□ -0.24
TRIM3O75382 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM3O75382 ALG3P1-201ENST00000508806 1114 ntBASIC13.58□□□□□ -0.24
TRIM3O75382 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
TRIM3O75382 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM3O75382 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.58□□□□□ -0.24
TRIM3O75382 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM3O75382 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.58□□□□□ -0.24
TRIM3O75382 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC13.58□□□□□ -0.24
TRIM3O75382 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM3O75382 AC005695.3-201ENST00000614522 232 ntBASIC13.58□□□□□ -0.24
TRIM3O75382 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM3O75382 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM3O75382 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM3O75382 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM3O75382 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
TRIM3O75382 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM3O75382 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM3O75382 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
TRIM3O75382 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM3O75382 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM3O75382 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.58□□□□□ -0.24
TRIM3O75382 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM3O75382 AC113367.3-201ENST00000508316 1912 ntBASIC13.58□□□□□ -0.24
TRIM3O75382 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.58□□□□□ -0.24
TRIM3O75382 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM3O75382 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM3O75382 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM3O75382 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM3O75382 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM3O75382 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM3O75382 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM3O75382 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.58□□□□□ -0.24
TRIM3O75382 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM3O75382 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM3O75382 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM3O75382 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM3O75382 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM3O75382 AC018529.2-202ENST00000611482 3087 ntBASIC13.58□□□□□ -0.24
TRIM3O75382 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRIM3O75382 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM3O75382 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM3O75382 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
TRIM3O75382 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM3O75382 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM3O75382 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM3O75382 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM3O75382 MST1P2-201ENST00000457982 2291 ntBASIC13.57□□□□□ -0.24
TRIM3O75382 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
TRIM3O75382 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM3O75382 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.57□□□□□ -0.24
TRIM3O75382 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM3O75382 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM3O75382 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.57□□□□□ -0.24
TRIM3O75382 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
TRIM3O75382 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM3O75382 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM3O75382 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.57□□□□□ -0.24
TRIM3O75382 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM3O75382 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM3O75382 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRIM3O75382 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms