Protein–RNA interactions for Protein: Q9BV40

VAMP8, Vesicle-associated membrane protein 8, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP8Q9BV40 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC10.51□□□□□ -0.73
VAMP8Q9BV40 FHDC1-201ENST00000260008 6480 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VAMP8Q9BV40 RNF144B-201ENST00000259939 5036 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VAMP8Q9BV40 SLC8A3-207ENST00000528359 2840 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VAMP8Q9BV40 SLC8A3-210ENST00000534137 2837 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VAMP8Q9BV40 ZKSCAN5-202ENST00000394170 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VAMP8Q9BV40 ZSCAN20-202ENST00000373413 2367 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VAMP8Q9BV40 C9orf3-203ENST00000375315 3136 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VAMP8Q9BV40 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
VAMP8Q9BV40 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC10.51□□□□□ -0.73
VAMP8Q9BV40 ASTN1-203ENST00000367657 4187 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VAMP8Q9BV40 GPR158-201ENST00000376351 6959 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VAMP8Q9BV40 AC245100.6-201ENST00000427169 1918 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 HSPA8P9-201ENST00000485881 1943 ntBASIC10.5□□□□□ -0.73
VAMP8Q9BV40 SHC1-210ENST00000448116 3481 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 AC009549.1-201ENST00000603468 1686 ntBASIC10.5□□□□□ -0.73
VAMP8Q9BV40 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 INO80-211ENST00000616814 4272 ntTSL 5 BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 SPATS2L-205ENST00000409151 1979 ntTSL 2 BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 PTK7-204ENST00000349241 3801 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 LINC01987-201ENST00000593118 2281 ntTSL 2 BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 LINC00642-201ENST00000419459 2026 ntTSL 2 BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 AC073439.1-201ENST00000624121 1774 ntBASIC10.5□□□□□ -0.73
VAMP8Q9BV40 ADPRH-204ENST00000478399 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 DHODH-205ENST00000572887 4824 ntAPPRIS ALT1 TSL 5 BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 BIVM-202ENST00000448849 3198 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 SF1-204ENST00000377390 3470 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 PNPO-217ENST00000642017 3465 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 DNAJB12-204ENST00000461919 2369 ntTSL 2 BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 SOD2-201ENST00000337404 991 ntTSL 2 BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 HMGA1P5-201ENST00000412453 271 ntBASIC10.5□□□□□ -0.73
VAMP8Q9BV40 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 AC092597.1-201ENST00000487352 616 ntBASIC10.5□□□□□ -0.73
VAMP8Q9BV40 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 CFL1-202ENST00000524553 860 ntTSL 2 BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 AC087623.3-201ENST00000607047 1098 ntBASIC10.5□□□□□ -0.73
VAMP8Q9BV40 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 ASPH-203ENST00000379454 5268 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 REPS1-205ENST00000415951 2424 ntTSL 5 BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 RBM39-243ENST00000528062 2421 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 RHBDL3-203ENST00000536287 4470 ntTSL 2 BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 CLEC4F-201ENST00000272367 2475 ntAPPRIS P3 TSL 2 BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 NCDN-203ENST00000373253 3677 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 LINC01106-201ENST00000436665 2244 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 CHMP2B-201ENST00000263780 2557 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 AK4-201ENST00000327299 6836 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 CLTCL1-210ENST00000617926 1695 ntTSL 2 BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 PLAU-201ENST00000372764 2321 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 GLB1L-203ENST00000409640 2042 ntTSL 2 BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 GNG7-201ENST00000382159 4208 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 PEX12-201ENST00000225873 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 MIGA2-201ENST00000358369 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 SPCS1-206ENST00000619898 4254 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 TUFT1-202ENST00000368848 3033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 ADAMTS20-202ENST00000395541 4633 ntTSL 5 BASIC10.5□□□□□ -0.73
VAMP8Q9BV40 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC10.49□□□□□ -0.73
VAMP8Q9BV40 ZNF621-201ENST00000310898 2404 ntTSL 2 BASIC10.49□□□□□ -0.73
VAMP8Q9BV40 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC10.49□□□□□ -0.73
VAMP8Q9BV40 FAM95C-205ENST00000637556 2421 ntAPPRIS P5 TSL 2 BASIC10.49□□□□□ -0.73
VAMP8Q9BV40 RNF220-202ENST00000355387 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VAMP8Q9BV40 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
VAMP8Q9BV40 AGPAT1-204ENST00000395496 2103 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
VAMP8Q9BV40 PYGO2-202ENST00000368457 3146 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VAMP8Q9BV40 PLK4-209ENST00000513090 3123 ntTSL 2 BASIC10.49□□□□□ -0.73
VAMP8Q9BV40 CARS-201ENST00000278224 2491 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
VAMP8Q9BV40 CACNA2D2-206ENST00000479441 3453 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
VAMP8Q9BV40 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC10.49□□□□□ -0.73
VAMP8Q9BV40 TADA2B-205ENST00000515646 3818 ntBASIC10.49□□□□□ -0.73
VAMP8Q9BV40 ZNF287-202ENST00000395825 3208 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VAMP8Q9BV40 POLR3E-201ENST00000299853 3697 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VAMP8Q9BV40 GRIA4-202ENST00000393125 2994 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
VAMP8Q9BV40 INTS4P1-201ENST00000438455 1935 ntBASIC10.49□□□□□ -0.73
VAMP8Q9BV40 FGF23-201ENST00000237837 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VAMP8Q9BV40 PRPF6-201ENST00000266079 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VAMP8Q9BV40 P2RX1-201ENST00000225538 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VAMP8Q9BV40 CICP2-201ENST00000420675 2328 ntBASIC10.49□□□□□ -0.73
VAMP8Q9BV40 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC10.49□□□□□ -0.73
VAMP8Q9BV40 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VAMP8Q9BV40 MED24-201ENST00000356271 3446 ntTSL 2 BASIC10.49□□□□□ -0.73
VAMP8Q9BV40 KIF28P-202ENST00000504864 3064 ntBASIC10.49□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms