Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NUP35Q8NFH5 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 RAD18-204ENST00000418463 563 ntTSL 4 BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 RAD18-205ENST00000421052 582 ntTSL 3 BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 RNA5SP419-201ENST00000515908 135 ntBASIC10.85□□□□□ -0.67
NUP35Q8NFH5 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 AL589739.1-201ENST00000607720 493 ntBASIC10.85□□□□□ -0.67
NUP35Q8NFH5 CITED2-204ENST00000618718 901 ntTSL 2 BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 AC004840.1-201ENST00000636359 365 ntBASIC10.85□□□□□ -0.67
NUP35Q8NFH5 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 AC139712.1-201ENST00000378256 1875 ntBASIC10.85□□□□□ -0.67
NUP35Q8NFH5 AL021155.1-201ENST00000438808 2637 ntBASIC10.85□□□□□ -0.67
NUP35Q8NFH5 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC10.85□□□□□ -0.67
NUP35Q8NFH5 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 REXO1L1P-201ENST00000379010 6598 ntBASIC10.84□□□□□ -0.67
NUP35Q8NFH5 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 PKIG-203ENST00000372887 769 ntTSL 3 BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 AL080243.2-201ENST00000418783 582 ntBASIC10.84□□□□□ -0.67
NUP35Q8NFH5 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 AC004832.2-201ENST00000426397 482 ntBASIC10.84□□□□□ -0.67
NUP35Q8NFH5 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 AC026434.2-201ENST00000506094 1078 ntBASIC10.84□□□□□ -0.67
NUP35Q8NFH5 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 GATD1-206ENST00000526325 756 ntTSL 5 BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC10.84□□□□□ -0.67
NUP35Q8NFH5 AC105339.1-204ENST00000636249 355 ntBASIC10.84□□□□□ -0.67
NUP35Q8NFH5 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
NUP35Q8NFH5 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms