Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
LYSMD2Q8IV50 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 AC092139.4-201ENST00000624318 2794 ntBASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 MTND6P24-201ENST00000440466 518 ntBASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 LINC01115-203ENST00000606068 577 ntBASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 AC027601.4-201ENST00000611259 610 ntBASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 FAM197Y3-203ENST00000618346 717 ntBASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LYSMD2Q8IV50 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LYSMD2Q8IV50 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LYSMD2Q8IV50 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.71□□□□□ -0.37
LYSMD2Q8IV50 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LYSMD2Q8IV50 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LYSMD2Q8IV50 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC12.71□□□□□ -0.37
LYSMD2Q8IV50 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LYSMD2Q8IV50 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LYSMD2Q8IV50 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LYSMD2Q8IV50 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LYSMD2Q8IV50 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
LYSMD2Q8IV50 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LYSMD2Q8IV50 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC12.71□□□□□ -0.37
LYSMD2Q8IV50 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LYSMD2Q8IV50 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LYSMD2Q8IV50 AC015688.4-201ENST00000580780 1647 ntBASIC12.71□□□□□ -0.37
LYSMD2Q8IV50 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.71□□□□□ -0.37
LYSMD2Q8IV50 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LYSMD2Q8IV50 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
LYSMD2Q8IV50 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LYSMD2Q8IV50 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
LYSMD2Q8IV50 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LYSMD2Q8IV50 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LYSMD2Q8IV50 MED15P5-201ENST00000423150 992 ntBASIC12.71□□□□□ -0.37
LYSMD2Q8IV50 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.71□□□□□ -0.37
LYSMD2Q8IV50 AL450487.1-201ENST00000426799 995 ntBASIC12.71□□□□□ -0.37
LYSMD2Q8IV50 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
LYSMD2Q8IV50 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC12.71□□□□□ -0.37
LYSMD2Q8IV50 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.71□□□□□ -0.37
LYSMD2Q8IV50 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LYSMD2Q8IV50 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
LYSMD2Q8IV50 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC12.71□□□□□ -0.37
LYSMD2Q8IV50 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.71□□□□□ -0.37
LYSMD2Q8IV50 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
LYSMD2Q8IV50 AC004840.1-201ENST00000636359 365 ntBASIC12.71□□□□□ -0.37
LYSMD2Q8IV50 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.71□□□□□ -0.37
LYSMD2Q8IV50 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LYSMD2Q8IV50 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LYSMD2Q8IV50 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
LYSMD2Q8IV50 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LYSMD2Q8IV50 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms