Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 KRT17P5-201ENST00000332088 839 ntBASIC16.11■□□□□ 0.17
TRIM50Q86XT4 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 IGF1-203ENST00000392904 761 ntTSL 5 BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 NAGK-204ENST00000443872 878 ntTSL 3 BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 AC098935.1-201ENST00000446057 611 ntBASIC16.11■□□□□ 0.17
TRIM50Q86XT4 DUTP3-201ENST00000450025 415 ntBASIC16.11■□□□□ 0.17
TRIM50Q86XT4 LDHBP1-201ENST00000455730 1119 ntBASIC16.11■□□□□ 0.17
TRIM50Q86XT4 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 AC093752.3-201ENST00000567343 901 ntBASIC16.11■□□□□ 0.17
TRIM50Q86XT4 MIR6842-201ENST00000612539 65 ntBASIC16.11■□□□□ 0.17
TRIM50Q86XT4 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 AP003419.4-201ENST00000616071 517 ntBASIC16.11■□□□□ 0.17
TRIM50Q86XT4 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM50Q86XT4 AGGF1P1-201ENST00000509500 2073 ntBASIC16.1■□□□□ 0.17
TRIM50Q86XT4 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TRIM50Q86XT4 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
TRIM50Q86XT4 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM50Q86XT4 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM50Q86XT4 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM50Q86XT4 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM50Q86XT4 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM50Q86XT4 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRIM50Q86XT4 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.1■□□□□ 0.17
TRIM50Q86XT4 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM50Q86XT4 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
TRIM50Q86XT4 SOD2-202ENST00000367054 815 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM50Q86XT4 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM50Q86XT4 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC16.1■□□□□ 0.17
TRIM50Q86XT4 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC16.1■□□□□ 0.17
TRIM50Q86XT4 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TRIM50Q86XT4 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC16.1■□□□□ 0.17
TRIM50Q86XT4 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC16.1■□□□□ 0.17
TRIM50Q86XT4 SORD2P-201ENST00000558556 1069 ntBASIC16.1■□□□□ 0.17
TRIM50Q86XT4 NPM1P43-201ENST00000558669 786 ntBASIC16.1■□□□□ 0.17
TRIM50Q86XT4 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC16.1■□□□□ 0.17
TRIM50Q86XT4 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM50Q86XT4 AC005632.3-201ENST00000605544 308 ntBASIC16.1■□□□□ 0.17
TRIM50Q86XT4 AC087045.2-201ENST00000606279 1003 ntBASIC16.1■□□□□ 0.17
TRIM50Q86XT4 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM50Q86XT4 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM50Q86XT4 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM50Q86XT4 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM50Q86XT4 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM50Q86XT4 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC16.1■□□□□ 0.17
TRIM50Q86XT4 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRIM50Q86XT4 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM50Q86XT4 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.1■□□□□ 0.17
TRIM50Q86XT4 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM50Q86XT4 AC007686.3-201ENST00000619017 3487 ntBASIC16.09■□□□□ 0.17
TRIM50Q86XT4 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM50Q86XT4 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM50Q86XT4 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM50Q86XT4 TNRC18P2-201ENST00000417666 2714 ntBASIC16.09■□□□□ 0.17
TRIM50Q86XT4 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRIM50Q86XT4 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM50Q86XT4 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC16.09■□□□□ 0.17
TRIM50Q86XT4 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC16.09■□□□□ 0.17
TRIM50Q86XT4 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM50Q86XT4 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM50Q86XT4 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM50Q86XT4 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM50Q86XT4 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM50Q86XT4 RPL17P11-201ENST00000417593 544 ntBASIC16.09■□□□□ 0.17
TRIM50Q86XT4 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM50Q86XT4 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC16.09■□□□□ 0.17
TRIM50Q86XT4 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC16.09■□□□□ 0.17
TRIM50Q86XT4 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC16.09■□□□□ 0.17
TRIM50Q86XT4 COX6A1P2-201ENST00000620597 330 ntBASIC16.09■□□□□ 0.17
TRIM50Q86XT4 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRIM50Q86XT4 CMC2-224ENST00000630396 481 ntTSL 5 BASIC16.09■□□□□ 0.17
TRIM50Q86XT4 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM50Q86XT4 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM50Q86XT4 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM50Q86XT4 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM50Q86XT4 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM50Q86XT4 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM50Q86XT4 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM50Q86XT4 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM50Q86XT4 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM50Q86XT4 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.09■□□□□ 0.17
TRIM50Q86XT4 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM50Q86XT4 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms