Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 C1QBPP1-201ENST00000400117 770 ntBASIC12.62□□□□□ -0.39
UBA52P62987 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.62□□□□□ -0.39
UBA52P62987 BCYRN1-201ENST00000418539 200 ntBASIC12.62□□□□□ -0.39
UBA52P62987 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
UBA52P62987 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.62□□□□□ -0.39
UBA52P62987 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.62□□□□□ -0.39
UBA52P62987 AC007551.1-201ENST00000457394 519 ntBASIC12.62□□□□□ -0.39
UBA52P62987 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC12.62□□□□□ -0.39
UBA52P62987 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
UBA52P62987 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
UBA52P62987 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBA52P62987 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC12.62□□□□□ -0.39
UBA52P62987 CD74-212ENST00000524315 584 ntTSL 5 BASIC12.62□□□□□ -0.39
UBA52P62987 AGER-214ENST00000538695 487 ntTSL 2 BASIC12.62□□□□□ -0.39
UBA52P62987 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC12.62□□□□□ -0.39
UBA52P62987 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC12.62□□□□□ -0.39
UBA52P62987 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.62□□□□□ -0.39
UBA52P62987 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC12.62□□□□□ -0.39
UBA52P62987 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC12.62□□□□□ -0.39
UBA52P62987 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC12.62□□□□□ -0.39
UBA52P62987 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
UBA52P62987 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBA52P62987 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBA52P62987 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
UBA52P62987 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.62□□□□□ -0.39
UBA52P62987 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.62□□□□□ -0.39
UBA52P62987 AL118506.1-201ENST00000601296 3082 ntBASIC12.62□□□□□ -0.39
UBA52P62987 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC12.62□□□□□ -0.39
UBA52P62987 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBA52P62987 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC12.62□□□□□ -0.39
UBA52P62987 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBA52P62987 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBA52P62987 ZBTB45P2-201ENST00000452245 1531 ntBASIC12.62□□□□□ -0.39
UBA52P62987 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBA52P62987 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.62□□□□□ -0.39
UBA52P62987 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
UBA52P62987 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
UBA52P62987 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
UBA52P62987 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBA52P62987 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBA52P62987 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBA52P62987 CICP16-201ENST00000502609 2813 ntBASIC12.61□□□□□ -0.39
UBA52P62987 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBA52P62987 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBA52P62987 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
UBA52P62987 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
UBA52P62987 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
UBA52P62987 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBA52P62987 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBA52P62987 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
UBA52P62987 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
UBA52P62987 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
UBA52P62987 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBA52P62987 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
UBA52P62987 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.61□□□□□ -0.39
UBA52P62987 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
UBA52P62987 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBA52P62987 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.61□□□□□ -0.39
UBA52P62987 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBA52P62987 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
UBA52P62987 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC12.61□□□□□ -0.39
UBA52P62987 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.61□□□□□ -0.39
UBA52P62987 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBA52P62987 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
UBA52P62987 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBA52P62987 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
UBA52P62987 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
UBA52P62987 AC092933.1-201ENST00000393644 945 ntBASIC12.61□□□□□ -0.39
UBA52P62987 TOMM22P5-201ENST00000416399 439 ntBASIC12.61□□□□□ -0.39
UBA52P62987 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC12.61□□□□□ -0.39
UBA52P62987 YBX1P6-201ENST00000442962 1002 ntBASIC12.61□□□□□ -0.39
UBA52P62987 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC12.61□□□□□ -0.39
UBA52P62987 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
UBA52P62987 PFN1P12-201ENST00000455938 534 ntBASIC12.61□□□□□ -0.39
UBA52P62987 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBA52P62987 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
UBA52P62987 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBA52P62987 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBA52P62987 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC12.61□□□□□ -0.39
UBA52P62987 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC12.61□□□□□ -0.39
UBA52P62987 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC12.61□□□□□ -0.39
UBA52P62987 AP000812.2-201ENST00000538934 718 ntBASIC12.61□□□□□ -0.39
UBA52P62987 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC12.61□□□□□ -0.39
UBA52P62987 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC12.61□□□□□ -0.39
UBA52P62987 AC120045.2-201ENST00000567334 178 ntBASIC12.61□□□□□ -0.39
UBA52P62987 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.61□□□□□ -0.39
UBA52P62987 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
UBA52P62987 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.61□□□□□ -0.39
UBA52P62987 AL049840.4-201ENST00000602422 811 ntBASIC12.61□□□□□ -0.39
UBA52P62987 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.61□□□□□ -0.39
UBA52P62987 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC12.61□□□□□ -0.39
UBA52P62987 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBA52P62987 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
UBA52P62987 AC131902.2-201ENST00000566892 2172 ntBASIC12.61□□□□□ -0.39
UBA52P62987 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.61□□□□□ -0.39
UBA52P62987 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.61□□□□□ -0.39
UBA52P62987 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC12.61□□□□□ -0.39
UBA52P62987 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
UBA52P62987 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
UBA52P62987 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms