Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CENPFP49454 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CENPFP49454 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CENPFP49454 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CENPFP49454 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC15.81■□□□□ 0.12
CENPFP49454 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CENPFP49454 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC15.81■□□□□ 0.12
CENPFP49454 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CENPFP49454 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC15.81■□□□□ 0.12
CENPFP49454 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CENPFP49454 OR3A1-202ENST00000615105 966 ntBASIC15.81■□□□□ 0.12
CENPFP49454 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CENPFP49454 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CENPFP49454 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CENPFP49454 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CENPFP49454 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CENPFP49454 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.81■□□□□ 0.12
CENPFP49454 CICP16-201ENST00000502609 2813 ntBASIC15.81■□□□□ 0.12
CENPFP49454 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CENPFP49454 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC15.81■□□□□ 0.12
CENPFP49454 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC15.81■□□□□ 0.12
CENPFP49454 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC15.81■□□□□ 0.12
CENPFP49454 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC15.81■□□□□ 0.12
CENPFP49454 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CENPFP49454 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CENPFP49454 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CENPFP49454 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CENPFP49454 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CENPFP49454 AC015656.1-201ENST00000624209 3578 ntBASIC15.81■□□□□ 0.12
CENPFP49454 AC064801.2-201ENST00000625052 1303 ntBASIC15.81■□□□□ 0.12
CENPFP49454 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.81■□□□□ 0.12
CENPFP49454 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
CENPFP49454 AC092573.1-201ENST00000433054 884 ntBASIC15.81■□□□□ 0.12
CENPFP49454 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC15.81■□□□□ 0.12
CENPFP49454 AC004801.1-201ENST00000549557 360 ntBASIC15.81■□□□□ 0.12
CENPFP49454 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC15.81■□□□□ 0.12
CENPFP49454 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CENPFP49454 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CENPFP49454 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
CENPFP49454 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.8■□□□□ 0.12
CENPFP49454 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CENPFP49454 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CENPFP49454 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC15.8■□□□□ 0.12
CENPFP49454 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CENPFP49454 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CENPFP49454 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CENPFP49454 RHOC-205ENST00000369636 786 ntTSL 2 BASIC15.8■□□□□ 0.12
CENPFP49454 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CENPFP49454 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC15.8■□□□□ 0.12
CENPFP49454 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC15.8■□□□□ 0.12
CENPFP49454 RNA5SP420-201ENST00000516997 137 ntBASIC15.8■□□□□ 0.12
CENPFP49454 AC132812.1-201ENST00000583145 892 ntBASIC15.8■□□□□ 0.12
CENPFP49454 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CENPFP49454 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
CENPFP49454 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CENPFP49454 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
CENPFP49454 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CENPFP49454 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.8■□□□□ 0.12
CENPFP49454 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CENPFP49454 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CENPFP49454 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.8■□□□□ 0.12
CENPFP49454 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CENPFP49454 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CENPFP49454 AC111170.3-201ENST00000624282 2464 ntBASIC15.8■□□□□ 0.12
CENPFP49454 GH1-203ENST00000351388 685 ntTSL 2 BASIC15.8■□□□□ 0.12
CENPFP49454 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CENPFP49454 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CENPFP49454 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC15.8■□□□□ 0.12
CENPFP49454 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC15.8■□□□□ 0.12
CENPFP49454 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC15.8■□□□□ 0.12
CENPFP49454 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC15.8■□□□□ 0.12
CENPFP49454 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CENPFP49454 GRAMD4P6-201ENST00000556999 244 ntBASIC15.8■□□□□ 0.12
CENPFP49454 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CENPFP49454 AC092115.1-201ENST00000566277 1402 ntBASIC15.8■□□□□ 0.12
CENPFP49454 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CENPFP49454 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CENPFP49454 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CENPFP49454 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CENPFP49454 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CENPFP49454 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CENPFP49454 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CENPFP49454 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CENPFP49454 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.79■□□□□ 0.12
CENPFP49454 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CENPFP49454 AC093106.1-201ENST00000437271 352 ntBASIC15.79■□□□□ 0.12
CENPFP49454 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC15.79■□□□□ 0.12
CENPFP49454 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC15.79■□□□□ 0.12
CENPFP49454 AC005777.1-201ENST00000588332 187 ntBASIC15.79■□□□□ 0.12
CENPFP49454 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CENPFP49454 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC15.79■□□□□ 0.12
CENPFP49454 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC15.79■□□□□ 0.12
CENPFP49454 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CENPFP49454 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CENPFP49454 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CENPFP49454 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CENPFP49454 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CENPFP49454 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CENPFP49454 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CENPFP49454 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms