Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.09□□□□□ -0.31
APOBEC1P41238 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOBEC1P41238 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOBEC1P41238 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
APOBEC1P41238 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
APOBEC1P41238 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOBEC1P41238 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APOBEC1P41238 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.09□□□□□ -0.31
APOBEC1P41238 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APOBEC1P41238 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOBEC1P41238 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOBEC1P41238 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APOBEC1P41238 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
APOBEC1P41238 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APOBEC1P41238 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOBEC1P41238 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.09□□□□□ -0.31
APOBEC1P41238 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
APOBEC1P41238 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APOBEC1P41238 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APOBEC1P41238 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.09□□□□□ -0.31
APOBEC1P41238 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.09□□□□□ -0.31
APOBEC1P41238 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.09□□□□□ -0.31
APOBEC1P41238 HLA-J-204ENST00000495278 958 ntBASIC13.09□□□□□ -0.31
APOBEC1P41238 AC106794.1-201ENST00000506935 792 ntBASIC13.09□□□□□ -0.31
APOBEC1P41238 SCARNA21-201ENST00000517026 139 ntBASIC13.09□□□□□ -0.31
APOBEC1P41238 AC022217.1-201ENST00000521069 738 ntBASIC13.09□□□□□ -0.31
APOBEC1P41238 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.09□□□□□ -0.31
APOBEC1P41238 AC126915.1-201ENST00000522847 1038 ntBASIC13.09□□□□□ -0.31
APOBEC1P41238 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.09□□□□□ -0.31
APOBEC1P41238 PGAM1P5-201ENST00000548011 764 ntBASIC13.09□□□□□ -0.31
APOBEC1P41238 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
APOBEC1P41238 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOBEC1P41238 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13.09□□□□□ -0.31
APOBEC1P41238 AL022313.4-201ENST00000562756 2046 ntBASIC13.09□□□□□ -0.31
APOBEC1P41238 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.09□□□□□ -0.31
APOBEC1P41238 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.09□□□□□ -0.31
APOBEC1P41238 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.09□□□□□ -0.31
APOBEC1P41238 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.09□□□□□ -0.31
APOBEC1P41238 AC022748.3-201ENST00000621828 275 ntBASIC13.09□□□□□ -0.31
APOBEC1P41238 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.09□□□□□ -0.31
APOBEC1P41238 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.09□□□□□ -0.31
APOBEC1P41238 AL033527.4-201ENST00000641026 673 ntBASIC13.09□□□□□ -0.31
APOBEC1P41238 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
APOBEC1P41238 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.09□□□□□ -0.31
APOBEC1P41238 ST20-AS1-201ENST00000560255 4223 ntBASIC13.09□□□□□ -0.31
APOBEC1P41238 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOBEC1P41238 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOBEC1P41238 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.09□□□□□ -0.31
APOBEC1P41238 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC13.09□□□□□ -0.31
APOBEC1P41238 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APOBEC1P41238 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
APOBEC1P41238 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOBEC1P41238 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
APOBEC1P41238 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
APOBEC1P41238 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
APOBEC1P41238 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.31
APOBEC1P41238 FAM90A7P-201ENST00000382628 1395 ntBASIC13.08□□□□□ -0.31
APOBEC1P41238 FAM90A23P-201ENST00000400136 1395 ntBASIC13.08□□□□□ -0.31
APOBEC1P41238 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.31
APOBEC1P41238 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
APOBEC1P41238 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOBEC1P41238 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.08□□□□□ -0.32
APOBEC1P41238 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOBEC1P41238 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOBEC1P41238 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APOBEC1P41238 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
APOBEC1P41238 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOBEC1P41238 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOBEC1P41238 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
APOBEC1P41238 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APOBEC1P41238 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOBEC1P41238 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOBEC1P41238 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOBEC1P41238 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
APOBEC1P41238 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOBEC1P41238 XBP1P1-201ENST00000436573 652 ntBASIC13.08□□□□□ -0.32
APOBEC1P41238 VDAC1P1-201ENST00000439229 848 ntBASIC13.08□□□□□ -0.32
APOBEC1P41238 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.08□□□□□ -0.32
APOBEC1P41238 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.08□□□□□ -0.32
APOBEC1P41238 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOBEC1P41238 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.08□□□□□ -0.32
APOBEC1P41238 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.08□□□□□ -0.32
APOBEC1P41238 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.08□□□□□ -0.32
APOBEC1P41238 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.08□□□□□ -0.32
APOBEC1P41238 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC13.08□□□□□ -0.32
APOBEC1P41238 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.08□□□□□ -0.32
APOBEC1P41238 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APOBEC1P41238 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.08□□□□□ -0.32
APOBEC1P41238 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.08□□□□□ -0.32
APOBEC1P41238 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APOBEC1P41238 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOBEC1P41238 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
APOBEC1P41238 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOBEC1P41238 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.08□□□□□ -0.32
APOBEC1P41238 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
APOBEC1P41238 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.08□□□□□ -0.32
APOBEC1P41238 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
APOBEC1P41238 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
APOBEC1P41238 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOBEC1P41238 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms