Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
DEFA4P12838 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
DEFA4P12838 NSL1-201ENST00000366976 722 ntTSL 2 BASIC11.88□□□□□ -0.51
DEFA4P12838 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC11.88□□□□□ -0.51
DEFA4P12838 CALY-202ENST00000368555 783 ntTSL 2 BASIC11.88□□□□□ -0.51
DEFA4P12838 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
DEFA4P12838 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
DEFA4P12838 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
DEFA4P12838 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
DEFA4P12838 WDR53-203ENST00000429115 683 ntTSL 2 BASIC11.88□□□□□ -0.51
DEFA4P12838 TERF1P3-201ENST00000505638 1227 ntBASIC11.88□□□□□ -0.51
DEFA4P12838 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
DEFA4P12838 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC11.88□□□□□ -0.51
DEFA4P12838 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC11.88□□□□□ -0.51
DEFA4P12838 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
DEFA4P12838 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC11.88□□□□□ -0.51
DEFA4P12838 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC11.88□□□□□ -0.51
DEFA4P12838 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC11.88□□□□□ -0.51
DEFA4P12838 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC11.88□□□□□ -0.51
DEFA4P12838 AC008494.3-201ENST00000606615 944 ntBASIC11.88□□□□□ -0.51
DEFA4P12838 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC11.88□□□□□ -0.51
DEFA4P12838 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
DEFA4P12838 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
DEFA4P12838 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
DEFA4P12838 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC11.88□□□□□ -0.51
DEFA4P12838 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC11.88□□□□□ -0.51
DEFA4P12838 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC11.88□□□□□ -0.51
DEFA4P12838 HNRNPA1P48-201ENST00000562726 1377 ntBASIC11.88□□□□□ -0.51
DEFA4P12838 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
DEFA4P12838 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
DEFA4P12838 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
DEFA4P12838 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC11.88□□□□□ -0.51
DEFA4P12838 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
DEFA4P12838 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
DEFA4P12838 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
DEFA4P12838 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
DEFA4P12838 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC11.88□□□□□ -0.51
DEFA4P12838 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
DEFA4P12838 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
DEFA4P12838 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
DEFA4P12838 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC11.87□□□□□ -0.51
DEFA4P12838 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
DEFA4P12838 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
DEFA4P12838 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
DEFA4P12838 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
DEFA4P12838 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
DEFA4P12838 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
DEFA4P12838 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC11.87□□□□□ -0.51
DEFA4P12838 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
DEFA4P12838 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
DEFA4P12838 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
DEFA4P12838 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC11.87□□□□□ -0.51
DEFA4P12838 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
DEFA4P12838 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
DEFA4P12838 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC11.87□□□□□ -0.51
DEFA4P12838 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
DEFA4P12838 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
DEFA4P12838 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
DEFA4P12838 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC11.87□□□□□ -0.51
DEFA4P12838 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
DEFA4P12838 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC11.87□□□□□ -0.51
DEFA4P12838 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC11.87□□□□□ -0.51
DEFA4P12838 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC11.87□□□□□ -0.51
DEFA4P12838 BCRP1-201ENST00000444246 691 ntBASIC11.87□□□□□ -0.51
DEFA4P12838 GALT-202ENST00000450095 1280 ntTSL 2 BASIC11.87□□□□□ -0.51
DEFA4P12838 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
DEFA4P12838 OARD1-208ENST00000469104 704 ntTSL 2 BASIC11.87□□□□□ -0.51
DEFA4P12838 GIMAP3P-201ENST00000495150 836 ntBASIC11.87□□□□□ -0.51
DEFA4P12838 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
DEFA4P12838 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
DEFA4P12838 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC11.87□□□□□ -0.51
DEFA4P12838 AP001063.1-201ENST00000568332 529 ntBASIC11.87□□□□□ -0.51
DEFA4P12838 AC009486.1-201ENST00000569860 813 ntBASIC11.87□□□□□ -0.51
DEFA4P12838 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC11.87□□□□□ -0.51
DEFA4P12838 AC140912.1-201ENST00000577171 1054 ntBASIC11.87□□□□□ -0.51
DEFA4P12838 MIR4745-201ENST00000577608 62 ntBASIC11.87□□□□□ -0.51
DEFA4P12838 CHCHD2P3-201ENST00000603038 451 ntBASIC11.87□□□□□ -0.51
DEFA4P12838 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC11.87□□□□□ -0.51
DEFA4P12838 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
DEFA4P12838 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
DEFA4P12838 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
DEFA4P12838 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC11.87□□□□□ -0.51
DEFA4P12838 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
DEFA4P12838 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
DEFA4P12838 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
DEFA4P12838 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
DEFA4P12838 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
DEFA4P12838 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
DEFA4P12838 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC11.87□□□□□ -0.51
DEFA4P12838 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
DEFA4P12838 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
DEFA4P12838 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
DEFA4P12838 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
DEFA4P12838 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
DEFA4P12838 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
DEFA4P12838 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
DEFA4P12838 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC11.87□□□□□ -0.51
DEFA4P12838 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
DEFA4P12838 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
DEFA4P12838 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms