Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 AP000358.1-201ENST00000456260 156 ntBASIC13.62□□□□□ -0.23
CTSBP07858 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC13.62□□□□□ -0.23
CTSBP07858 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CTSBP07858 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC13.62□□□□□ -0.23
CTSBP07858 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC13.62□□□□□ -0.23
CTSBP07858 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC13.62□□□□□ -0.23
CTSBP07858 AC140658.4-201ENST00000561990 352 ntBASIC13.62□□□□□ -0.23
CTSBP07858 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CTSBP07858 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC13.62□□□□□ -0.23
CTSBP07858 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC13.62□□□□□ -0.23
CTSBP07858 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC13.62□□□□□ -0.23
CTSBP07858 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CTSBP07858 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.62□□□□□ -0.23
CTSBP07858 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CTSBP07858 SIGLEC18P-201ENST00000602271 909 ntBASIC13.62□□□□□ -0.23
CTSBP07858 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
CTSBP07858 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CTSBP07858 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC13.62□□□□□ -0.23
CTSBP07858 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CTSBP07858 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CTSBP07858 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CTSBP07858 MST1P2-201ENST00000457982 2291 ntBASIC13.62□□□□□ -0.23
CTSBP07858 KRT8P31-201ENST00000504812 1408 ntBASIC13.62□□□□□ -0.23
CTSBP07858 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.62□□□□□ -0.23
CTSBP07858 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC13.62□□□□□ -0.23
CTSBP07858 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CTSBP07858 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CTSBP07858 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CTSBP07858 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
CTSBP07858 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CTSBP07858 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CTSBP07858 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CTSBP07858 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CTSBP07858 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CTSBP07858 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CTSBP07858 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CTSBP07858 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CTSBP07858 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC13.61□□□□□ -0.23
CTSBP07858 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CTSBP07858 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.61□□□□□ -0.23
CTSBP07858 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CTSBP07858 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
CTSBP07858 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CTSBP07858 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC13.61□□□□□ -0.23
CTSBP07858 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.61□□□□□ -0.23
CTSBP07858 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CTSBP07858 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CTSBP07858 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CTSBP07858 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CTSBP07858 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CTSBP07858 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CTSBP07858 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CTSBP07858 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC13.61□□□□□ -0.23
CTSBP07858 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC13.61□□□□□ -0.23
CTSBP07858 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC13.61□□□□□ -0.23
CTSBP07858 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CTSBP07858 MPV17-204ENST00000399052 749 ntTSL 4 BASIC13.61□□□□□ -0.23
CTSBP07858 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC13.61□□□□□ -0.23
CTSBP07858 HINT2P1-201ENST00000419438 481 ntBASIC13.61□□□□□ -0.23
CTSBP07858 AL807761.2-201ENST00000422849 729 ntBASIC13.61□□□□□ -0.23
CTSBP07858 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC13.61□□□□□ -0.23
CTSBP07858 AC069218.1-201ENST00000435269 762 ntBASIC13.61□□□□□ -0.23
CTSBP07858 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC13.61□□□□□ -0.23
CTSBP07858 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CTSBP07858 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
CTSBP07858 NEU3-205ENST00000531619 582 ntTSL 5 BASIC13.61□□□□□ -0.23
CTSBP07858 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CTSBP07858 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
CTSBP07858 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC13.61□□□□□ -0.23
CTSBP07858 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC13.61□□□□□ -0.23
CTSBP07858 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CTSBP07858 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC13.61□□□□□ -0.23
CTSBP07858 MIR4522-201ENST00000584932 87 ntBASIC13.61□□□□□ -0.23
CTSBP07858 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC13.61□□□□□ -0.23
CTSBP07858 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC13.61□□□□□ -0.23
CTSBP07858 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CTSBP07858 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CTSBP07858 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CTSBP07858 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CTSBP07858 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CTSBP07858 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CTSBP07858 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CTSBP07858 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CTSBP07858 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CTSBP07858 KRT18P9-201ENST00000604826 1300 ntBASIC13.61□□□□□ -0.23
CTSBP07858 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CTSBP07858 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CTSBP07858 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.61□□□□□ -0.23
CTSBP07858 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CTSBP07858 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CTSBP07858 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CTSBP07858 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CTSBP07858 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CTSBP07858 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.61□□□□□ -0.23
CTSBP07858 AC027601.5-201ENST00000624065 2482 ntBASIC13.61□□□□□ -0.23
CTSBP07858 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.6□□□□□ -0.23
CTSBP07858 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CTSBP07858 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CTSBP07858 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
CTSBP07858 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms