Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C4orf47A7E2U8 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C4orf47A7E2U8 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C4orf47A7E2U8 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C4orf47A7E2U8 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C4orf47A7E2U8 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
C4orf47A7E2U8 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C4orf47A7E2U8 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
C4orf47A7E2U8 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.09□□□□□ -0.15
C4orf47A7E2U8 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.09□□□□□ -0.15
C4orf47A7E2U8 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C4orf47A7E2U8 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.09□□□□□ -0.15
C4orf47A7E2U8 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.09□□□□□ -0.15
C4orf47A7E2U8 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C4orf47A7E2U8 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.09□□□□□ -0.15
C4orf47A7E2U8 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
C4orf47A7E2U8 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
C4orf47A7E2U8 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C4orf47A7E2U8 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
C4orf47A7E2U8 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
C4orf47A7E2U8 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
C4orf47A7E2U8 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
C4orf47A7E2U8 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
C4orf47A7E2U8 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.15
C4orf47A7E2U8 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
C4orf47A7E2U8 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 SAT1-201ENST00000379251 801 ntTSL 2 BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 SAT1-202ENST00000379253 909 ntTSL 2 BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 SAT1-203ENST00000379254 868 ntTSL 3 BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 MIR1301-201ENST00000408518 82 ntBASIC14.08□□□□□ -0.16
C4orf47A7E2U8 CELP-201ENST00000411440 1249 ntTSL 5 BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 AC026470.1-201ENST00000478038 846 ntBASIC14.08□□□□□ -0.16
C4orf47A7E2U8 AC083801.1-201ENST00000491689 358 ntBASIC14.08□□□□□ -0.16
C4orf47A7E2U8 AC093826.1-201ENST00000508655 993 ntBASIC14.08□□□□□ -0.16
C4orf47A7E2U8 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 AC021016.3-201ENST00000608367 477 ntBASIC14.08□□□□□ -0.16
C4orf47A7E2U8 AC006483.2-201ENST00000609813 515 ntBASIC14.08□□□□□ -0.16
C4orf47A7E2U8 MIR6816-201ENST00000620368 66 ntBASIC14.08□□□□□ -0.16
C4orf47A7E2U8 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 AL136172.1-201ENST00000598590 1394 ntBASIC14.08□□□□□ -0.16
C4orf47A7E2U8 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
C4orf47A7E2U8 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C4orf47A7E2U8 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
C4orf47A7E2U8 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
C4orf47A7E2U8 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C4orf47A7E2U8 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
C4orf47A7E2U8 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
C4orf47A7E2U8 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
C4orf47A7E2U8 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
C4orf47A7E2U8 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.07□□□□□ -0.16
C4orf47A7E2U8 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C4orf47A7E2U8 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
C4orf47A7E2U8 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.07□□□□□ -0.16
C4orf47A7E2U8 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
C4orf47A7E2U8 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
C4orf47A7E2U8 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C4orf47A7E2U8 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
C4orf47A7E2U8 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C4orf47A7E2U8 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
C4orf47A7E2U8 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
C4orf47A7E2U8 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
C4orf47A7E2U8 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
C4orf47A7E2U8 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
C4orf47A7E2U8 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
C4orf47A7E2U8 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms