Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
MBD1Q9UIS9 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
MBD1Q9UIS9 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.49□□□□□ -0.09
MBD1Q9UIS9 KRT17P5-201ENST00000332088 839 ntBASIC14.49□□□□□ -0.09
MBD1Q9UIS9 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
MBD1Q9UIS9 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
MBD1Q9UIS9 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
MBD1Q9UIS9 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.49□□□□□ -0.09
MBD1Q9UIS9 AC234644.1-201ENST00000406065 370 ntBASIC14.49□□□□□ -0.09
MBD1Q9UIS9 MIR1227-201ENST00000408484 88 ntBASIC14.49□□□□□ -0.09
MBD1Q9UIS9 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC14.49□□□□□ -0.09
MBD1Q9UIS9 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC14.49□□□□□ -0.09
MBD1Q9UIS9 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
MBD1Q9UIS9 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC14.49□□□□□ -0.09
MBD1Q9UIS9 AC141586.1-203ENST00000567242 366 ntBASIC14.49□□□□□ -0.09
MBD1Q9UIS9 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
MBD1Q9UIS9 AC005041.3-201ENST00000606287 649 ntBASIC14.49□□□□□ -0.09
MBD1Q9UIS9 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
MBD1Q9UIS9 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
MBD1Q9UIS9 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.49□□□□□ -0.09
MBD1Q9UIS9 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
MBD1Q9UIS9 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
MBD1Q9UIS9 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
MBD1Q9UIS9 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
MBD1Q9UIS9 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MBD1Q9UIS9 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.49□□□□□ -0.09
MBD1Q9UIS9 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
MBD1Q9UIS9 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MBD1Q9UIS9 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
MBD1Q9UIS9 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MBD1Q9UIS9 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.49□□□□□ -0.09
MBD1Q9UIS9 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
MBD1Q9UIS9 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.49□□□□□ -0.09
MBD1Q9UIS9 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MBD1Q9UIS9 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
MBD1Q9UIS9 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 HLA-DMA-203ENST00000395305 777 ntBASIC14.48□□□□□ -0.09
MBD1Q9UIS9 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 TPT1P11-201ENST00000458482 498 ntBASIC14.48□□□□□ -0.09
MBD1Q9UIS9 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.48□□□□□ -0.09
MBD1Q9UIS9 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 AC015802.1-201ENST00000588104 1449 ntBASIC14.48□□□□□ -0.09
MBD1Q9UIS9 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 AL009178.2-201ENST00000597278 2719 ntBASIC14.48□□□□□ -0.09
MBD1Q9UIS9 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MBD1Q9UIS9 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.47□□□□□ -0.09
MBD1Q9UIS9 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MBD1Q9UIS9 AC090502.4-201ENST00000551714 1386 ntBASIC14.47□□□□□ -0.09
MBD1Q9UIS9 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC14.47□□□□□ -0.09
MBD1Q9UIS9 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MBD1Q9UIS9 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
MBD1Q9UIS9 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MBD1Q9UIS9 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.47□□□□□ -0.09
MBD1Q9UIS9 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MBD1Q9UIS9 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.47□□□□□ -0.09
MBD1Q9UIS9 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.47□□□□□ -0.09
MBD1Q9UIS9 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.47□□□□□ -0.09
MBD1Q9UIS9 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
MBD1Q9UIS9 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC14.47□□□□□ -0.09
MBD1Q9UIS9 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms