Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 IL9RP2-201ENST00000423948 1312 ntBASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 NPTN-IT1-201ENST00000628401 2283 ntBASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 KRT19P2-202ENST00000557173 1012 ntBASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 AC034105.1-201ENST00000563488 319 ntBASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 AP002472.1-201ENST00000577490 586 ntBASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 Z83851.2-201ENST00000609564 659 ntBASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB3IPQ96QF0 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 AL590627.1-203ENST00000421194 1026 ntBASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 AL353705.2-201ENST00000428243 662 ntBASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 AC145285.3-201ENST00000564603 959 ntBASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 BAP1-211ENST00000615113 489 ntBASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 BX640515.1-201ENST00000617215 977 ntBASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 AC012531.1-201ENST00000562848 2680 ntBASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 ABCD1P2-201ENST00000429313 1601 ntBASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB3IPQ96QF0 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms