Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC17.65■□□□□ 0.42
RPGRQ92834 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
RPGRQ92834 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPGRQ92834 LINC00115-201ENST00000473798 1317 ntBASIC17.65■□□□□ 0.42
RPGRQ92834 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RPGRQ92834 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPGRQ92834 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPGRQ92834 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPGRQ92834 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RPGRQ92834 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPGRQ92834 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPGRQ92834 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RPGRQ92834 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.65■□□□□ 0.42
RPGRQ92834 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RPGRQ92834 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
RPGRQ92834 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RPGRQ92834 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
RPGRQ92834 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC17.64■□□□□ 0.42
RPGRQ92834 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RPGRQ92834 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RPGRQ92834 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RPGRQ92834 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RPGRQ92834 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPGRQ92834 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
RPGRQ92834 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RPGRQ92834 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.64■□□□□ 0.41
RPGRQ92834 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPGRQ92834 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPGRQ92834 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPGRQ92834 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPGRQ92834 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RPGRQ92834 LINC00265-2P-201ENST00000413372 782 ntBASIC17.64■□□□□ 0.41
RPGRQ92834 RN7SL788P-201ENST00000460504 316 ntBASIC17.64■□□□□ 0.41
RPGRQ92834 RN7SL375P-201ENST00000492442 298 ntBASIC17.64■□□□□ 0.41
RPGRQ92834 AC093826.1-201ENST00000508655 993 ntBASIC17.64■□□□□ 0.41
RPGRQ92834 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC17.64■□□□□ 0.41
RPGRQ92834 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC17.64■□□□□ 0.41
RPGRQ92834 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC17.64■□□□□ 0.41
RPGRQ92834 MIR6746-201ENST00000620971 63 ntBASIC17.64■□□□□ 0.41
RPGRQ92834 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPGRQ92834 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPGRQ92834 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RPGRQ92834 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPGRQ92834 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RPGRQ92834 AC064801.2-201ENST00000625052 1303 ntBASIC17.64■□□□□ 0.41
RPGRQ92834 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RPGRQ92834 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RPGRQ92834 AL354702.1-201ENST00000442006 1960 ntBASIC17.64■□□□□ 0.41
RPGRQ92834 AC073347.1-201ENST00000421633 2643 ntBASIC17.64■□□□□ 0.41
RPGRQ92834 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.64■□□□□ 0.41
RPGRQ92834 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC17.64■□□□□ 0.41
RPGRQ92834 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC17.64■□□□□ 0.41
RPGRQ92834 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPGRQ92834 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPGRQ92834 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC17.63■□□□□ 0.41
RPGRQ92834 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPGRQ92834 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC17.63■□□□□ 0.41
RPGRQ92834 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPGRQ92834 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPGRQ92834 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPGRQ92834 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RPGRQ92834 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.63■□□□□ 0.41
RPGRQ92834 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPGRQ92834 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPGRQ92834 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPGRQ92834 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RPGRQ92834 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.63■□□□□ 0.41
RPGRQ92834 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPGRQ92834 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RPGRQ92834 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPGRQ92834 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPGRQ92834 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPGRQ92834 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
RPGRQ92834 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RPGRQ92834 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC17.63■□□□□ 0.41
RPGRQ92834 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RPGRQ92834 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC17.63■□□□□ 0.41
RPGRQ92834 AL135901.1-201ENST00000451812 333 ntBASIC17.63■□□□□ 0.41
RPGRQ92834 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC17.63■□□□□ 0.41
RPGRQ92834 IGHV1-12-201ENST00000518307 205 ntBASIC17.63■□□□□ 0.41
RPGRQ92834 VENTXP3-201ENST00000546480 773 ntBASIC17.63■□□□□ 0.41
RPGRQ92834 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC17.63■□□□□ 0.41
RPGRQ92834 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
RPGRQ92834 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC17.63■□□□□ 0.41
RPGRQ92834 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC17.63■□□□□ 0.41
RPGRQ92834 AC104506.1-201ENST00000609247 429 ntBASIC17.63■□□□□ 0.41
RPGRQ92834 HMGB1P24-201ENST00000611897 328 ntBASIC17.63■□□□□ 0.41
RPGRQ92834 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPGRQ92834 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPGRQ92834 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC17.63■□□□□ 0.41
RPGRQ92834 AJ011931.1-201ENST00000618749 2492 ntBASIC17.63■□□□□ 0.41
RPGRQ92834 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RPGRQ92834 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RPGRQ92834 MSANTD2P1-201ENST00000445341 1368 ntBASIC17.63■□□□□ 0.41
RPGRQ92834 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPGRQ92834 AC006486.2-201ENST00000624246 2199 ntBASIC17.63■□□□□ 0.41
RPGRQ92834 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RPGRQ92834 PKD1P5-201ENST00000532415 10291 ntBASIC17.63■□□□□ 0.41
RPGRQ92834 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC17.63■□□□□ 0.41
RPGRQ92834 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms