Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
AP3S1Q92572 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC12.81□□□□□ -0.36
AP3S1Q92572 GOLGA2P5-201ENST00000266746 2395 ntBASIC12.81□□□□□ -0.36
AP3S1Q92572 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
AP3S1Q92572 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
AP3S1Q92572 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
AP3S1Q92572 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
AP3S1Q92572 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
AP3S1Q92572 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
AP3S1Q92572 TUBB3P1-201ENST00000405796 1332 ntBASIC12.81□□□□□ -0.36
AP3S1Q92572 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
AP3S1Q92572 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
AP3S1Q92572 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
AP3S1Q92572 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.81□□□□□ -0.36
AP3S1Q92572 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
AP3S1Q92572 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
AP3S1Q92572 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
AP3S1Q92572 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC12.81□□□□□ -0.36
AP3S1Q92572 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
AP3S1Q92572 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
AP3S1Q92572 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
AP3S1Q92572 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
AP3S1Q92572 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
AP3S1Q92572 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
AP3S1Q92572 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S1Q92572 ABCD1P2-201ENST00000429313 1601 ntBASIC12.8□□□□□ -0.36
AP3S1Q92572 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
AP3S1Q92572 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S1Q92572 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S1Q92572 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.8□□□□□ -0.36
AP3S1Q92572 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S1Q92572 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S1Q92572 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S1Q92572 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S1Q92572 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S1Q92572 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
AP3S1Q92572 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
AP3S1Q92572 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S1Q92572 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
AP3S1Q92572 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
AP3S1Q92572 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S1Q92572 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC12.8□□□□□ -0.36
AP3S1Q92572 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
AP3S1Q92572 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
AP3S1Q92572 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S1Q92572 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S1Q92572 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S1Q92572 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC12.8□□□□□ -0.36
AP3S1Q92572 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S1Q92572 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S1Q92572 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S1Q92572 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S1Q92572 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC12.8□□□□□ -0.36
AP3S1Q92572 AC131206.1-201ENST00000538078 1211 ntBASIC12.8□□□□□ -0.36
AP3S1Q92572 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S1Q92572 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
AP3S1Q92572 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
AP3S1Q92572 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
AP3S1Q92572 AP001005.1-201ENST00000571755 1248 ntBASIC12.8□□□□□ -0.36
AP3S1Q92572 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
AP3S1Q92572 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.8□□□□□ -0.36
AP3S1Q92572 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.8□□□□□ -0.36
AP3S1Q92572 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC12.8□□□□□ -0.36
AP3S1Q92572 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
AP3S1Q92572 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
AP3S1Q92572 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.8□□□□□ -0.36
AP3S1Q92572 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S1Q92572 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S1Q92572 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
AP3S1Q92572 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC12.8□□□□□ -0.36
AP3S1Q92572 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S1Q92572 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S1Q92572 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S1Q92572 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S1Q92572 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
AP3S1Q92572 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.8□□□□□ -0.36
AP3S1Q92572 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S1Q92572 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S1Q92572 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC12.8□□□□□ -0.36
AP3S1Q92572 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP3S1Q92572 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S1Q92572 AC104109.2-201ENST00000602919 1418 ntBASIC12.79□□□□□ -0.36
AP3S1Q92572 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S1Q92572 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
AP3S1Q92572 AC003102.2-201ENST00000589195 1469 ntBASIC12.79□□□□□ -0.36
AP3S1Q92572 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S1Q92572 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S1Q92572 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC12.79□□□□□ -0.36
AP3S1Q92572 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S1Q92572 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.79□□□□□ -0.36
AP3S1Q92572 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
AP3S1Q92572 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S1Q92572 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S1Q92572 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S1Q92572 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S1Q92572 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S1Q92572 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S1Q92572 LINC00567-201ENST00000569854 3409 ntBASIC12.79□□□□□ -0.36
AP3S1Q92572 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP3S1Q92572 AC008620.2-201ENST00000510294 1569 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms