Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 SEC16A-205ENST00000371706 8093 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 PEX5L-205ENST00000464614 1817 ntAPPRIS ALT2 TSL 2 BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 SMPD4-205ENST00000431183 3614 ntTSL 2 BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 SLC35A4-202ENST00000514199 3617 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 AP1G1-202ENST00000393512 3593 ntAPPRIS ALT1 TSL 5 BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 LIPG-202ENST00000427224 1760 ntTSL 2 BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 SPIN2A-202ENST00000374908 2468 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 NFIA-207ENST00000403491 9487 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 ST3GAL1-207ENST00000521180 6951 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 MAPK4-205ENST00000588540 3144 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 RARB-203ENST00000437042 2775 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 AC092964.1-201ENST00000623304 1399 ntBASIC8.63□□□□□ -1.03
SVIPQ8NHG7 LIG3-201ENST00000262327 3055 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 DCLK1-201ENST00000255448 5703 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 AC011337.1-201ENST00000606930 3317 ntBASIC8.63□□□□□ -1.03
SVIPQ8NHG7 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 GRIK3-202ENST00000373093 2955 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 ABL2-211ENST00000512653 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 SGO1-206ENST00000421451 1969 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 SH2D4A-204ENST00000519207 1984 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 SYTL2-206ENST00000389960 4299 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 LACC1-203ENST00000441843 4262 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 LIN54-202ENST00000442461 4254 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 CES2-201ENST00000317091 3927 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 PLEC-206ENST00000357649 14689 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 TNFAIP3-209ENST00000619035 2267 ntTSL 5 BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 AF131215.5-201ENST00000530248 1939 ntBASIC8.63□□□□□ -1.03
SVIPQ8NHG7 AFF2-205ENST00000370460 13746 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 AC121334.1-201ENST00000396414 802 ntBASIC8.63□□□□□ -1.03
SVIPQ8NHG7 NAP1L4P3-201ENST00000432820 1147 ntBASIC8.63□□□□□ -1.03
SVIPQ8NHG7 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 AC026401.2-201ENST00000576454 503 ntTSL 3 BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 AC012313.9-201ENST00000619318 633 ntBASIC8.63□□□□□ -1.03
SVIPQ8NHG7 AP003072.5-201ENST00000623872 773 ntBASIC8.63□□□□□ -1.03
SVIPQ8NHG7 FRMPD3-201ENST00000276185 7304 ntAPPRIS P2 TSL 5 BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 MEG3-220ENST00000522771 6984 ntTSL 5 BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 SMYD1-201ENST00000419482 4433 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 ELF5-202ENST00000312319 2450 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 PIPSL-202ENST00000489875 2733 ntBASIC8.63□□□□□ -1.03
SVIPQ8NHG7 FBXO44-206ENST00000376770 3320 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 CORO2B-202ENST00000540068 3332 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 SEMA6A-212ENST00000513137 3640 ntTSL 2 BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 LRRC8A-202ENST00000372599 4161 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 MAP2K4-202ENST00000415385 3856 ntAPPRIS ALT2 TSL 2 BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 LINC01660-204ENST00000619172 3572 ntTSL 5 BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 PC-214ENST00000628663 1470 ntTSL 5 BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 CTPS1-202ENST00000372621 3201 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 PLCD4-203ENST00000432688 3225 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 ESR1-208ENST00000443427 6357 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 ENC1-206ENST00000537006 2024 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 DPY19L1-201ENST00000310974 4870 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 EML1-202ENST00000327921 3715 ntTSL 2 BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 PIK3C2B-202ENST00000367187 7686 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 EIF3C-202ENST00000395587 3137 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SVIPQ8NHG7 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SVIPQ8NHG7 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SVIPQ8NHG7 CALM1-201ENST00000356978 4242 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
SVIPQ8NHG7 MYH2-204ENST00000532183 2528 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SVIPQ8NHG7 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SVIPQ8NHG7 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SVIPQ8NHG7 ADGRG1-214ENST00000562558 3858 ntAPPRIS ALT1 TSL 5 BASIC8.62□□□□□ -1.03
SVIPQ8NHG7 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
SVIPQ8NHG7 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SVIPQ8NHG7 SYNE1-230ENST00000495090 1907 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SVIPQ8NHG7 ZNF423-203ENST00000561648 7907 ntAPPRIS P3 TSL 5 BASIC8.62□□□□□ -1.03
SVIPQ8NHG7 RALYL-205ENST00000521268 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
SVIPQ8NHG7 UPRT-203ENST00000373383 2186 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SVIPQ8NHG7 EIF2A-203ENST00000460851 2198 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
SVIPQ8NHG7 SLC25A36-208ENST00000507429 3537 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
SVIPQ8NHG7 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
SVIPQ8NHG7 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC8.62□□□□□ -1.03
SVIPQ8NHG7 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
SVIPQ8NHG7 MECP2-201ENST00000303391 10505 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms