RNA–Protein interactions for RNA: ENST00000513137.5

SEMA6A-212, Transcript of semaphorin 6A, humanhuman

TSL 2 BASIC

Gene SEMA6A, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-212ENST00000513137 NISCHQ9Y2I1 1504 aa20.63■□□□□ 0.89
SEMA6A-212ENST00000513137 DCAF8L2P0C7V8 631 aa18.27■□□□□ 0.52
SEMA6A-212ENST00000513137 SHROOM4Q9ULL8 1493 aa17.96■□□□□ 0.47
SEMA6A-212ENST00000513137 CCDC180Q9P1Z9 1646 aa17.49■□□□□ 0.39
SEMA6A-212ENST00000513137 SUPT5HO00267 1087 aaKnown RBP17.49■□□□□ 0.39
SEMA6A-212ENST00000513137 ABCC9O60706 1549 aa17.27■□□□□ 0.36
SEMA6A-212ENST00000513137 ZCCHC6Q5VYS8 1495 aaKnown RBP17.26■□□□□ 0.35
SEMA6A-212ENST00000513137 SCRIBQ14160 1630 aa16.77■□□□□ 0.28
SEMA6A-212ENST00000513137 DCAF1Q9Y4B6 1507 aa16.64■□□□□ 0.25
SEMA6A-212ENST00000513137 PABPN1Q86U42 306 aaKnown RBP eCLIP16.62■□□□□ 0.25
SEMA6A-212ENST00000513137 NACADO15069 1562 aa16.47■□□□□ 0.23
SEMA6A-212ENST00000513137 RB1CC1Q8TDY2 1594 aa16.41■□□□□ 0.22
SEMA6A-212ENST00000513137 EHMT2Q96KQ7 1210 aa16.4■□□□□ 0.22
SEMA6A-212ENST00000513137 CHIC1Q5VXU3 224 aa16.37■□□□□ 0.21
SEMA6A-212ENST00000513137 FAM9AQ8IZU1 332 aaPredicted RBP16.3■□□□□ 0.2
SEMA6A-212ENST00000513137 MYO15BQ96JP2 1530 aa16.29■□□□□ 0.2
SEMA6A-212ENST00000513137 CECR2Q9BXF3 1484 aa16.28■□□□□ 0.2
SEMA6A-212ENST00000513137 RSF1Q96T23 1441 aaPredicted RBP16.24■□□□□ 0.19
SEMA6A-212ENST00000513137 TRIM41Q8WV44 630 aa16.19■□□□□ 0.18
SEMA6A-212ENST00000513137 MROH2BQ7Z745 1585 aa16.09■□□□□ 0.17
SEMA6A-212ENST00000513137 LOC105371045A0A1W2PR82 267 aa16.09■□□□□ 0.17
SEMA6A-212ENST00000513137 WIZO95785 1651 aa15.96■□□□□ 0.15
SEMA6A-212ENST00000513137 BAZ1AQ9NRL2 1556 aaPredicted RBP15.92■□□□□ 0.14
SEMA6A-212ENST00000513137 UNC13AQ9UPW8 1703 aa15.86■□□□□ 0.13
SEMA6A-212ENST00000513137 BICRAQ9NZM4 1560 aa15.78■□□□□ 0.12
SEMA6A-212ENST00000513137 SMARCA4P51532 1647 aa15.77■□□□□ 0.12
SEMA6A-212ENST00000513137 RANGAP1P46060 587 aaPredicted RBP15.73■□□□□ 0.11
SEMA6A-212ENST00000513137 PCGF6Q9BYE7 350 aa15.72■□□□□ 0.11
SEMA6A-212ENST00000513137 TTBK1Q5TCY1 1321 aaPredicted RBP15.7■□□□□ 0.1
SEMA6A-212ENST00000513137 CCDC88BA6NC98 1476 aa15.69■□□□□ 0.1
SEMA6A-212ENST00000513137 PPARGC1BQ86YN6 1023 aaKnown RBP15.68■□□□□ 0.1
SEMA6A-212ENST00000513137 BAZ1BQ9UIG0 1483 aaKnown RBP15.67■□□□□ 0.1
SEMA6A-212ENST00000513137 UBTFP17480 764 aaKnown RBP15.64■□□□□ 0.09
SEMA6A-212ENST00000513137 TOP2AP11388 1531 aaKnown RBP15.62■□□□□ 0.09
SEMA6A-212ENST00000513137 ATAD2BQ9ULI0 1458 aa15.59■□□□□ 0.09
SEMA6A-212ENST00000513137 ABCC8Q09428 1581 aa15.58■□□□□ 0.09
SEMA6A-212ENST00000513137 SMARCA2P51531 1590 aa15.51■□□□□ 0.07
SEMA6A-212ENST00000513137 EIF4G1Q04637 1599 aaKnown RBP15.46■□□□□ 0.07
SEMA6A-212ENST00000513137 WRNQ14191 1432 aaPredicted RBP eCLIP15.42■□□□□ 0.06
SEMA6A-212ENST00000513137 CSRNP3Q8WYN3 585 aa15.42■□□□□ 0.06
SEMA6A-212ENST00000513137 SOGA1O94964 1423 aa15.4■□□□□ 0.06
SEMA6A-212ENST00000513137 RUSC2Q8N2Y8 1516 aa15.3■□□□□ 0.04
SEMA6A-212ENST00000513137 DNAJC5BQ9UF47 199 aa15.29■□□□□ 0.04
SEMA6A-212ENST00000513137 NCAPD3P42695 1498 aa15.29■□□□□ 0.04
SEMA6A-212ENST00000513137 TRIM26Q12899 539 aaPredicted RBP15.29■□□□□ 0.04
SEMA6A-212ENST00000513137 APLP2Q06481 763 aa15.26■□□□□ 0.03
SEMA6A-212ENST00000513137 PEG3Q9GZU2 1588 aa15.24■□□□□ 0.03
SEMA6A-212ENST00000513137 CC2D2AQ9P2K1 1620 aa15.24■□□□□ 0.03
SEMA6A-212ENST00000513137 ATP1B4Q9UN42 357 aaPredicted RBP15.21■□□□□ 0.03
SEMA6A-212ENST00000513137 CADPSQ9ULU8 1353 aa15.16■□□□□ 0.02
SEMA6A-212ENST00000513137 SYNJ1O43426 1573 aa15.15■□□□□ 0.02
SEMA6A-212ENST00000513137 HMGXB3Q12766 1538 aa15.14■□□□□ 0.01
SEMA6A-212ENST00000513137 SLC24A1O60721 1099 aa15.12■□□□□ 0.01
SEMA6A-212ENST00000513137 CEP162Q5TB80 1403 aa15.11■□□□□ 0.01
SEMA6A-212ENST00000513137 NESP48681 1621 aa15.1■□□□□ 0.01
SEMA6A-212ENST00000513137 P3H3Q8IVL6 736 aa15.09■□□□□ 0.01
SEMA6A-212ENST00000513137 EEA1Q15075 1411 aa15.08■□□□□ 0
SEMA6A-212ENST00000513137 HRCP23327 699 aa15.08■□□□□ 0
SEMA6A-212ENST00000513137 GOLGA3Q08378 1498 aa15.06■□□□□ 0
SEMA6A-212ENST00000513137 CFTRP13569 1480 aa15.06■□□□□ 0
SEMA6A-212ENST00000513137 CUX2O14529 1486 aa15.03■□□□□ -0
SEMA6A-212ENST00000513137 TNIKQ9UKE5 1360 aa15.02■□□□□ -0
SEMA6A-212ENST00000513137 HNRNPUL2Q1KMD3 747 aaKnown RBP15.02■□□□□ -0
SEMA6A-212ENST00000513137 KIF27Q86VH2 1401 aa15.02□□□□□ -0.01
SEMA6A-212ENST00000513137 FANCD2Q9BXW9 1451 aa15.01□□□□□ -0.01
SEMA6A-212ENST00000513137 CEP164Q9UPV0 1460 aa15.01□□□□□ -0.01
SEMA6A-212ENST00000513137 CLIP1P30622 1438 aa15□□□□□ -0.01
SEMA6A-212ENST00000513137 RAPGEF2Q9Y4G8 1499 aa15□□□□□ -0.01
SEMA6A-212ENST00000513137 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15□□□□□ -0.01
SEMA6A-212ENST00000513137 CCER1Q8TC90 406 aaPredicted RBP15□□□□□ -0.01
SEMA6A-212ENST00000513137 CUX1P39880 1505 aa14.98□□□□□ -0.01
SEMA6A-212ENST00000513137 ITGAEP38570 1179 aa14.96□□□□□ -0.01
SEMA6A-212ENST00000513137 FBLN2P98095 1184 aa14.93□□□□□ -0.02
SEMA6A-212ENST00000513137 TDRD9Q8NDG6 1382 aaKnown RBP14.93□□□□□ -0.02
SEMA6A-212ENST00000513137 FGD5Q6ZNL6 1462 aa14.92□□□□□ -0.02
SEMA6A-212ENST00000513137 TOP2BQ02880 1626 aa14.92□□□□□ -0.02
SEMA6A-212ENST00000513137 RAD54L2Q9Y4B4 1467 aa14.92□□□□□ -0.02
SEMA6A-212ENST00000513137 PDS5BQ9NTI5 1447 aa14.89□□□□□ -0.03
SEMA6A-212ENST00000513137 ARID3CA6NKF2 412 aa14.88□□□□□ -0.03
SEMA6A-212ENST00000513137 CARMIL1Q5VZK9 1371 aa14.87□□□□□ -0.03
SEMA6A-212ENST00000513137 ERCC6Q03468 1493 aa14.83□□□□□ -0.03
SEMA6A-212ENST00000513137 IGF1RP08069 1367 aa14.81□□□□□ -0.04
SEMA6A-212ENST00000513137 TOPBP1Q92547 1522 aa14.78□□□□□ -0.04
SEMA6A-212ENST00000513137 BIVM-ERCC5R4GMW8 1640 aa14.76□□□□□ -0.05
SEMA6A-212ENST00000513137 POLA1P09884 1462 aaPredicted RBP14.76□□□□□ -0.05
SEMA6A-212ENST00000513137 ZEB1P37275 1124 aaPredicted RBP14.74□□□□□ -0.05
SEMA6A-212ENST00000513137 VPS8Q8N3P4 1428 aa14.73□□□□□ -0.05
SEMA6A-212ENST00000513137 FAM50AQ14320 339 aaKnown RBP14.73□□□□□ -0.05
SEMA6A-212ENST00000513137 KANK4Q5T7N3 995 aaPredicted RBP14.73□□□□□ -0.05
SEMA6A-212ENST00000513137 KIF21BO75037 1637 aa14.73□□□□□ -0.05
SEMA6A-212ENST00000513137 PRXQ9BXM0 1461 aa14.71□□□□□ -0.05
SEMA6A-212ENST00000513137 URB2Q14146 1524 aaKnown RBP14.7□□□□□ -0.06
SEMA6A-212ENST00000513137 LAMC3Q9Y6N6 1575 aa14.69□□□□□ -0.06
SEMA6A-212ENST00000513137 DNMBPQ6XZF7 1577 aa14.68□□□□□ -0.06
SEMA6A-212ENST00000513137 AQRO60306 1485 aaKnown RBP eCLIP14.68□□□□□ -0.06
SEMA6A-212ENST00000513137 CHMP7Q8WUX9 453 aaPredicted RBP14.67□□□□□ -0.06
SEMA6A-212ENST00000513137 GAPVD1Q14C86 1478 aa14.64□□□□□ -0.07
SEMA6A-212ENST00000513137 FHOD3Q2V2M9 1422 aa14.63□□□□□ -0.07
SEMA6A-212ENST00000513137 ARAP1Q96P48 1450 aa14.62□□□□□ -0.07
SEMA6A-212ENST00000513137 ERICH3Q5RHP9 1530 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms