RNA–Protein interactions for RNA: ENST00000255448.8

DCLK1-201, Transcript of doublecortin like kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK1, Length 5,703 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-201ENST00000255448 DCAF8L2P0C7V8 631 aa18.64■□□□□ 0.57
DCLK1-201ENST00000255448 NISCHQ9Y2I1 1504 aa18.17■□□□□ 0.5
DCLK1-201ENST00000255448 PELP1Q8IZL8 1130 aaKnown RBP17.82■□□□□ 0.44
DCLK1-201ENST00000255448 MYT1Q01538 1121 aa17.66■□□□□ 0.42
DCLK1-201ENST00000255448 SUPT5HO00267 1087 aaKnown RBP17.54■□□□□ 0.4
DCLK1-201ENST00000255448 SHROOM4Q9ULL8 1493 aa17.28■□□□□ 0.36
DCLK1-201ENST00000255448 PCGF6Q9BYE7 350 aa17.24■□□□□ 0.35
DCLK1-201ENST00000255448 CENPBP07199 599 aaPredicted RBP17.16■□□□□ 0.34
DCLK1-201ENST00000255448 ERICH6Q7L0X2 663 aa17.06■□□□□ 0.32
DCLK1-201ENST00000255448 EHMT2Q96KQ7 1210 aa16.95■□□□□ 0.3
DCLK1-201ENST00000255448 ZEB1P37275 1124 aaPredicted RBP16.85■□□□□ 0.29
DCLK1-201ENST00000255448 CCER1Q8TC90 406 aaPredicted RBP16.81■□□□□ 0.28
DCLK1-201ENST00000255448 APLP2Q06481 763 aa16.8■□□□□ 0.28
DCLK1-201ENST00000255448 FAM9AQ8IZU1 332 aaPredicted RBP16.73■□□□□ 0.27
DCLK1-201ENST00000255448 HRCP23327 699 aa16.72■□□□□ 0.27
DCLK1-201ENST00000255448 YTHDC1Q96MU7 727 aaKnown RBP16.71■□□□□ 0.27
DCLK1-201ENST00000255448 TTBK1Q5TCY1 1321 aaPredicted RBP16.53■□□□□ 0.24
DCLK1-201ENST00000255448 NEFLP07196 543 aa16.48■□□□□ 0.23
DCLK1-201ENST00000255448 PPARGC1BQ86YN6 1023 aaKnown RBP16.45■□□□□ 0.22
DCLK1-201ENST00000255448 TRIM41Q8WV44 630 aa16.37■□□□□ 0.21
DCLK1-201ENST00000255448 TRIM26Q12899 539 aaPredicted RBP16.24■□□□□ 0.19
DCLK1-201ENST00000255448 RANGAP1P46060 587 aaPredicted RBP16.2■□□□□ 0.18
DCLK1-201ENST00000255448 UBTFP17480 764 aaKnown RBP16.16■□□□□ 0.18
DCLK1-201ENST00000255448 GTF3C3Q9Y5Q9 886 aa16.16■□□□□ 0.18
DCLK1-201ENST00000255448 ATP1B4Q9UN42 357 aaPredicted RBP16.15■□□□□ 0.18
DCLK1-201ENST00000255448 RTL5Q5HYW3 569 aaPredicted RBP16.01■□□□□ 0.15
DCLK1-201ENST00000255448 DIEXFQ68CQ4 756 aaKnown RBP16■□□□□ 0.15
DCLK1-201ENST00000255448 DAXXQ9UER7 740 aaPredicted RBP15.97■□□□□ 0.15
DCLK1-201ENST00000255448 ACIN1Q9UKV3 1341 aaKnown RBP15.89■□□□□ 0.13
DCLK1-201ENST00000255448 BCANQ96GW7 911 aa15.81■□□□□ 0.12
DCLK1-201ENST00000255448 LOC105371045A0A1W2PR82 267 aa15.8■□□□□ 0.12
DCLK1-201ENST00000255448 ABCC9O60706 1549 aa15.77■□□□□ 0.11
DCLK1-201ENST00000255448 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.76■□□□□ 0.11
DCLK1-201ENST00000255448 EIF5BO60841 1220 aaKnown RBP15.7■□□□□ 0.1
DCLK1-201ENST00000255448 HNRNPUL2Q1KMD3 747 aaKnown RBP15.68■□□□□ 0.1
DCLK1-201ENST00000255448 SCAF1Q9H7N4 1312 aaKnown RBP15.68■□□□□ 0.1
DCLK1-201ENST00000255448 ZNF316A6NFI3 1004 aaPredicted RBP15.65■□□□□ 0.1
DCLK1-201ENST00000255448 CHIC1Q5VXU3 224 aa15.63■□□□□ 0.09
DCLK1-201ENST00000255448 MYT1LQ9UL68 1186 aa15.63■□□□□ 0.09
DCLK1-201ENST00000255448 PABPN1Q86U42 306 aaKnown RBP eCLIP15.61■□□□□ 0.09
DCLK1-201ENST00000255448 CDK11AQ9UQ88 783 aaPredicted RBP15.6■□□□□ 0.09
DCLK1-201ENST00000255448 ITGAEP38570 1179 aa15.52■□□□□ 0.08
DCLK1-201ENST00000255448 NEUROD1Q13562 356 aa15.52■□□□□ 0.08
DCLK1-201ENST00000255448 CNGB1Q14028 1251 aaPredicted RBP15.47■□□□□ 0.07
DCLK1-201ENST00000255448 GLIPR1L2Q4G1C9 344 aa15.45■□□□□ 0.06
DCLK1-201ENST00000255448 POLR3GLQ9BT43 218 aa15.44■□□□□ 0.06
DCLK1-201ENST00000255448 CLSPNQ9HAW4 1339 aa15.42■□□□□ 0.06
DCLK1-201ENST00000255448 BCL11AQ9H165 835 aa15.36■□□□□ 0.05
DCLK1-201ENST00000255448 ANP32AP39687 249 aaKnown RBP15.34■□□□□ 0.05
DCLK1-201ENST00000255448 ANP32EQ9BTT0 268 aa15.34■□□□□ 0.05
DCLK1-201ENST00000255448 FKBP8Q14318 412 aa15.3■□□□□ 0.04
DCLK1-201ENST00000255448 NBR1Q14596 966 aa15.29■□□□□ 0.04
DCLK1-201ENST00000255448 FAM50AQ14320 339 aaKnown RBP15.24■□□□□ 0.03
DCLK1-201ENST00000255448 NPM2Q86SE8 214 aaKnown RBP15.24■□□□□ 0.03
DCLK1-201ENST00000255448 ANP32CO43423 234 aa15.22■□□□□ 0.03
DCLK1-201ENST00000255448 FBLN2P98095 1184 aa15.19■□□□□ 0.02
DCLK1-201ENST00000255448 TRIM52Q96A61 297 aa15.15■□□□□ 0.02
DCLK1-201ENST00000255448 SLC4A1APQ9BWU0 796 aaKnown RBP15.13■□□□□ 0.01
DCLK1-201ENST00000255448 ZBTB47Q9UFB7 747 aaPredicted RBP15.08■□□□□ 0
DCLK1-201ENST00000255448 SCRIBQ14160 1630 aa15.07■□□□□ 0
DCLK1-201ENST00000255448 CSRNP3Q8WYN3 585 aa15.04■□□□□ -0
DCLK1-201ENST00000255448 RTN4Q9NQC3 1192 aaKnown RBP15.03■□□□□ -0
DCLK1-201ENST00000255448 ZCCHC6Q5VYS8 1495 aaKnown RBP15.01□□□□□ -0.01
DCLK1-201ENST00000255448 CCDC180Q9P1Z9 1646 aa14.99□□□□□ -0.01
DCLK1-201ENST00000255448 MIER1Q8N108 512 aa14.99□□□□□ -0.01
DCLK1-201ENST00000255448 ANP32BQ92688 251 aaKnown RBP14.96□□□□□ -0.01
DCLK1-201ENST00000255448 ARXQ96QS3 562 aa14.96□□□□□ -0.02
DCLK1-201ENST00000255448 ZNF326Q5BKZ1 582 aaKnown RBP14.9□□□□□ -0.02
DCLK1-201ENST00000255448 P3H3Q8IVL6 736 aa14.9□□□□□ -0.02
DCLK1-201ENST00000255448 HNRNPUQ00839 825 aaKnown RBP eCLIP14.9□□□□□ -0.02
DCLK1-201ENST00000255448 IRX6P78412 446 aaPredicted RBP14.87□□□□□ -0.03
DCLK1-201ENST00000255448 RB1CC1Q8TDY2 1594 aa14.85□□□□□ -0.03
DCLK1-201ENST00000255448 CCDC136Q96JN2 1154 aa14.84□□□□□ -0.03
DCLK1-201ENST00000255448 NPM1P06748 294 aaKnown RBP eCLIP14.84□□□□□ -0.03
DCLK1-201ENST00000255448 DCAF1Q9Y4B6 1507 aa14.84□□□□□ -0.03
DCLK1-201ENST00000255448 ARID3CA6NKF2 412 aa14.83□□□□□ -0.04
DCLK1-201ENST00000255448 DEKP35659 375 aaKnown RBP14.83□□□□□ -0.04
DCLK1-201ENST00000255448 DDX10Q13206 875 aaKnown RBP14.82□□□□□ -0.04
DCLK1-201ENST00000255448 NEFMP07197 916 aa14.81□□□□□ -0.04
DCLK1-201ENST00000255448 ZNF777Q9ULD5 760 aaPredicted RBP14.81□□□□□ -0.04
DCLK1-201ENST00000255448 CANXP27824 592 aaKnown RBP14.79□□□□□ -0.04
DCLK1-201ENST00000255448 ESF1Q9H501 851 aaKnown RBP14.78□□□□□ -0.04
DCLK1-201ENST00000255448 SUPT16HQ9Y5B9 1047 aaKnown RBP14.77□□□□□ -0.04
DCLK1-201ENST00000255448 ERICH6BQ5W0A0 696 aa14.77□□□□□ -0.04
DCLK1-201ENST00000255448 NAP1L5Q96NT1 182 aaPredicted RBP14.75□□□□□ -0.05
DCLK1-201ENST00000255448 HSP90AA1P07900 732 aaKnown RBP14.74□□□□□ -0.05
DCLK1-201ENST00000255448 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.74□□□□□ -0.05
DCLK1-201ENST00000255448 FAM9BQ8IZU0 186 aa14.74□□□□□ -0.05
DCLK1-201ENST00000255448 TNNT2P45379 298 aaPredicted RBP14.73□□□□□ -0.05
DCLK1-201ENST00000255448 UPF2Q9HAU5 1272 aaKnown RBP14.71□□□□□ -0.05
DCLK1-201ENST00000255448 NACADO15069 1562 aa14.7□□□□□ -0.06
DCLK1-201ENST00000255448 NOP58Q9Y2X3 529 aaKnown RBP14.69□□□□□ -0.06
DCLK1-201ENST00000255448 TRIM44Q96DX7 344 aaPredicted RBP14.68□□□□□ -0.06
DCLK1-201ENST00000255448 CHMP7Q8WUX9 453 aaPredicted RBP14.67□□□□□ -0.06
DCLK1-201ENST00000255448 LAS1LQ9Y4W2 734 aaKnown RBP14.67□□□□□ -0.06
DCLK1-201ENST00000255448 RBM19Q9Y4C8 960 aaKnown RBP14.66□□□□□ -0.06
DCLK1-201ENST00000255448 PPM1GO15355 546 aaPredicted RBP14.64□□□□□ -0.07
DCLK1-201ENST00000255448 DDRGK1Q96HY6 314 aa14.63□□□□□ -0.07
DCLK1-201ENST00000255448 TONSLQ96HA7 1378 aa14.63□□□□□ -0.07
DCLK1-201ENST00000255448 STAG3Q9UJ98 1225 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms