RNA–Protein interactions for RNA: ENST00000437042.6

RARB-203, Transcript of retinoic acid receptor beta, humanhuman

TSL 1 (best) BASIC

Gene RARB, Length 2,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARB-203ENST00000437042 NISCHQ9Y2I1 1504 aa24.64■■□□□ 1.53
RARB-203ENST00000437042 SHROOM4Q9ULL8 1493 aa21.03■□□□□ 0.96
RARB-203ENST00000437042 CCDC180Q9P1Z9 1646 aa20.92■□□□□ 0.94
RARB-203ENST00000437042 ZCCHC6Q5VYS8 1495 aaKnown RBP20.84■□□□□ 0.93
RARB-203ENST00000437042 SUPT5HO00267 1087 aaKnown RBP20.64■□□□□ 0.89
RARB-203ENST00000437042 DCAF8L2P0C7V8 631 aa20.42■□□□□ 0.86
RARB-203ENST00000437042 DCAF1Q9Y4B6 1507 aa20.21■□□□□ 0.83
RARB-203ENST00000437042 CHIC1Q5VXU3 224 aa20.09■□□□□ 0.81
RARB-203ENST00000437042 MYO15BQ96JP2 1530 aa20.02■□□□□ 0.8
RARB-203ENST00000437042 ABCC9O60706 1549 aa19.66■□□□□ 0.74
RARB-203ENST00000437042 SCRIBQ14160 1630 aa19.62■□□□□ 0.73
RARB-203ENST00000437042 RSF1Q96T23 1441 aaPredicted RBP19.51■□□□□ 0.71
RARB-203ENST00000437042 LOC105371045A0A1W2PR82 267 aa19.51■□□□□ 0.71
RARB-203ENST00000437042 HRCP23327 699 aa19.51■□□□□ 0.71
RARB-203ENST00000437042 PCGF6Q9BYE7 350 aa19.49■□□□□ 0.71
RARB-203ENST00000437042 NACADO15069 1562 aa19.34■□□□□ 0.69
RARB-203ENST00000437042 RB1CC1Q8TDY2 1594 aa19.31■□□□□ 0.68
RARB-203ENST00000437042 CECR2Q9BXF3 1484 aa19.23■□□□□ 0.67
RARB-203ENST00000437042 TRIM41Q8WV44 630 aa19.22■□□□□ 0.67
RARB-203ENST00000437042 MROH2BQ7Z745 1585 aa19.16■□□□□ 0.66
RARB-203ENST00000437042 TRIM26Q12899 539 aaPredicted RBP19.11■□□□□ 0.65
RARB-203ENST00000437042 PPARGC1BQ86YN6 1023 aaKnown RBP19.11■□□□□ 0.65
RARB-203ENST00000437042 WIZO95785 1651 aa19.07■□□□□ 0.64
RARB-203ENST00000437042 FAM9AQ8IZU1 332 aaPredicted RBP19.07■□□□□ 0.64
RARB-203ENST00000437042 BAZ1AQ9NRL2 1556 aaPredicted RBP18.93■□□□□ 0.62
RARB-203ENST00000437042 EHMT2Q96KQ7 1210 aa18.91■□□□□ 0.62
RARB-203ENST00000437042 EIF4G1Q04637 1599 aaKnown RBP18.81■□□□□ 0.6
RARB-203ENST00000437042 UNC13AQ9UPW8 1703 aa18.77■□□□□ 0.6
RARB-203ENST00000437042 SMARCA4P51532 1647 aa18.76■□□□□ 0.59
RARB-203ENST00000437042 TOP2AP11388 1531 aaKnown RBP18.75■□□□□ 0.59
RARB-203ENST00000437042 CCDC88BA6NC98 1476 aa18.69■□□□□ 0.58
RARB-203ENST00000437042 ZEB1P37275 1124 aaPredicted RBP18.69■□□□□ 0.58
RARB-203ENST00000437042 SMARCA2P51531 1590 aa18.66■□□□□ 0.58
RARB-203ENST00000437042 ABCC8Q09428 1581 aa18.65■□□□□ 0.58
RARB-203ENST00000437042 PABPN1Q86U42 306 aaKnown RBP eCLIP18.54■□□□□ 0.56
RARB-203ENST00000437042 BICRAQ9NZM4 1560 aa18.52■□□□□ 0.56
RARB-203ENST00000437042 SOGA1O94964 1423 aa18.48■□□□□ 0.55
RARB-203ENST00000437042 RUSC2Q8N2Y8 1516 aa18.4■□□□□ 0.54
RARB-203ENST00000437042 CEP162Q5TB80 1403 aa18.4■□□□□ 0.54
RARB-203ENST00000437042 PEG3Q9GZU2 1588 aa18.39■□□□□ 0.53
RARB-203ENST00000437042 WRNQ14191 1432 aaPredicted RBP eCLIP18.38■□□□□ 0.531e-7■■■■■ 66.8
RARB-203ENST00000437042 CSRNP3Q8WYN3 585 aa18.38■□□□□ 0.53
RARB-203ENST00000437042 TNIKQ9UKE5 1360 aa18.37■□□□□ 0.53
RARB-203ENST00000437042 EEA1Q15075 1411 aa18.36■□□□□ 0.53
RARB-203ENST00000437042 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.35■□□□□ 0.53
RARB-203ENST00000437042 UBTFP17480 764 aaKnown RBP18.3■□□□□ 0.52
RARB-203ENST00000437042 TTBK1Q5TCY1 1321 aaPredicted RBP18.3■□□□□ 0.52
RARB-203ENST00000437042 CCER1Q8TC90 406 aaPredicted RBP18.29■□□□□ 0.52
RARB-203ENST00000437042 ATAD2BQ9ULI0 1458 aa18.27■□□□□ 0.52
RARB-203ENST00000437042 GOLGA3Q08378 1498 aa18.25■□□□□ 0.51
RARB-203ENST00000437042 SYNJ1O43426 1573 aa18.24■□□□□ 0.51
RARB-203ENST00000437042 BAZ1BQ9UIG0 1483 aaKnown RBP18.21■□□□□ 0.51
RARB-203ENST00000437042 CEP164Q9UPV0 1460 aa18.15■□□□□ 0.5
RARB-203ENST00000437042 KIF21BO75037 1637 aa18.13■□□□□ 0.49
RARB-203ENST00000437042 CLIP1P30622 1438 aa18.05■□□□□ 0.48
RARB-203ENST00000437042 RAPGEF2Q9Y4G8 1499 aa18.02■□□□□ 0.48
RARB-203ENST00000437042 TOP2BQ02880 1626 aa18.01■□□□□ 0.47
RARB-203ENST00000437042 SCAF1Q9H7N4 1312 aaKnown RBP17.99■□□□□ 0.47
RARB-203ENST00000437042 VPS8Q8N3P4 1428 aa17.97■□□□□ 0.47
RARB-203ENST00000437042 DIEXFQ68CQ4 756 aaKnown RBP17.95■□□□□ 0.46
RARB-203ENST00000437042 BIVM-ERCC5R4GMW8 1640 aa17.95■□□□□ 0.46
RARB-203ENST00000437042 RANGAP1P46060 587 aaPredicted RBP17.93■□□□□ 0.46
RARB-203ENST00000437042 HNRNPUL2Q1KMD3 747 aaKnown RBP17.92■□□□□ 0.46
RARB-203ENST00000437042 NCAPD3P42695 1498 aa17.91■□□□□ 0.46
RARB-203ENST00000437042 HMGXB3Q12766 1538 aa17.89■□□□□ 0.45
RARB-203ENST00000437042 APLP2Q06481 763 aa17.89■□□□□ 0.45
RARB-203ENST00000437042 PRXQ9BXM0 1461 aa17.84■□□□□ 0.45
RARB-203ENST00000437042 CUX1P39880 1505 aa17.83■□□□□ 0.45
RARB-203ENST00000437042 ERICH3Q5RHP9 1530 aa17.83■□□□□ 0.45
RARB-203ENST00000437042 ZNF316A6NFI3 1004 aaPredicted RBP17.82■□□□□ 0.44
RARB-203ENST00000437042 ACIN1Q9UKV3 1341 aaKnown RBP17.82■□□□□ 0.44
RARB-203ENST00000437042 NEUROD1Q13562 356 aa17.8■□□□□ 0.44
RARB-203ENST00000437042 CFTRP13569 1480 aa17.77■□□□□ 0.44
RARB-203ENST00000437042 ARAP1Q96P48 1450 aa17.76■□□□□ 0.43
RARB-203ENST00000437042 KIF27Q86VH2 1401 aa17.75■□□□□ 0.43
RARB-203ENST00000437042 CENPBP07199 599 aaPredicted RBP17.69■□□□□ 0.42
RARB-203ENST00000437042 KANK4Q5T7N3 995 aaPredicted RBP17.69■□□□□ 0.42
RARB-203ENST00000437042 PRDM2Q13029 1718 aa17.64■□□□□ 0.41
RARB-203ENST00000437042 GTF3C3Q9Y5Q9 886 aa17.61■□□□□ 0.41
RARB-203ENST00000437042 ARHGAP35Q9NRY4 1499 aa17.61■□□□□ 0.41
RARB-203ENST00000437042 PELP1Q8IZL8 1130 aaKnown RBP17.58■□□□□ 0.4
RARB-203ENST00000437042 CUX2O14529 1486 aa17.57■□□□□ 0.4
RARB-203ENST00000437042 DHX57Q6P158 1386 aaKnown RBP17.57■□□□□ 0.4
RARB-203ENST00000437042 MIER1Q8N108 512 aa17.57■□□□□ 0.4
RARB-203ENST00000437042 RRBP1Q9P2E9 1410 aaKnown RBP17.57■□□□□ 0.4
RARB-203ENST00000437042 IGF1RP08069 1367 aa17.57■□□□□ 0.4
RARB-203ENST00000437042 CADPSQ9ULU8 1353 aa17.57■□□□□ 0.4
RARB-203ENST00000437042 CLSPNQ9HAW4 1339 aa17.55■□□□□ 0.4
RARB-203ENST00000437042 YTHDC1Q96MU7 727 aaKnown RBP17.52■□□□□ 0.4
RARB-203ENST00000437042 FGD5Q6ZNL6 1462 aa17.51■□□□□ 0.39
RARB-203ENST00000437042 CARMIL1Q5VZK9 1371 aa17.49■□□□□ 0.39
RARB-203ENST00000437042 CCNB3Q8WWL7 1395 aa17.49■□□□□ 0.39
RARB-203ENST00000437042 CC2D2AQ9P2K1 1620 aa17.44■□□□□ 0.38
RARB-203ENST00000437042 ITGAEP38570 1179 aa17.43■□□□□ 0.38
RARB-203ENST00000437042 TIAM1Q13009 1591 aa17.42■□□□□ 0.38
RARB-203ENST00000437042 MAP3K1Q13233 1512 aa17.4■□□□□ 0.38
RARB-203ENST00000437042 FANCD2Q9BXW9 1451 aa17.4■□□□□ 0.38
RARB-203ENST00000437042 LRRC9Q6ZRR7 1453 aa17.36■□□□□ 0.37
RARB-203ENST00000437042 P3H3Q8IVL6 736 aa17.34■□□□□ 0.37
RARB-203ENST00000437042 RAD54L2Q9Y4B4 1467 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms