RNA–Protein interactions for RNA: ENST00000619172.4

LINC01660-204, Transcript of long intergenic non-protein coding RNA 1660, humanhuman

TSL 5 BASIC

Gene LINC01660, Length 3,572 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01660-204ENST00000619172 NISCHQ9Y2I1 1504 aa17.56■□□□□ 0.4
LINC01660-204ENST00000619172 SHROOM4Q9ULL8 1493 aa16.51■□□□□ 0.23
LINC01660-204ENST00000619172 SUPT5HO00267 1087 aaKnown RBP16.46■□□□□ 0.23
LINC01660-204ENST00000619172 DCAF8L2P0C7V8 631 aa16.46■□□□□ 0.23
LINC01660-204ENST00000619172 EHMT2Q96KQ7 1210 aa15.75■□□□□ 0.11
LINC01660-204ENST00000619172 PCGF6Q9BYE7 350 aa15.73■□□□□ 0.11
LINC01660-204ENST00000619172 PPARGC1BQ86YN6 1023 aaKnown RBP15.43■□□□□ 0.06
LINC01660-204ENST00000619172 FAM9AQ8IZU1 332 aaPredicted RBP15.42■□□□□ 0.06
LINC01660-204ENST00000619172 LOC105371045A0A1W2PR82 267 aa15.39■□□□□ 0.05
LINC01660-204ENST00000619172 CHIC1Q5VXU3 224 aa15.37■□□□□ 0.05
LINC01660-204ENST00000619172 HRCP23327 699 aa15.29■□□□□ 0.04
LINC01660-204ENST00000619172 TTBK1Q5TCY1 1321 aaPredicted RBP15.2■□□□□ 0.02
LINC01660-204ENST00000619172 MYO15BQ96JP2 1530 aa15.02■□□□□ -0
LINC01660-204ENST00000619172 TRIM41Q8WV44 630 aa15.02■□□□□ -0
LINC01660-204ENST00000619172 TRIM26Q12899 539 aaPredicted RBP14.89□□□□□ -0.03
LINC01660-204ENST00000619172 CCER1Q8TC90 406 aaPredicted RBP14.75□□□□□ -0.05
LINC01660-204ENST00000619172 RANGAP1P46060 587 aaPredicted RBP14.75□□□□□ -0.05
LINC01660-204ENST00000619172 ZCCHC6Q5VYS8 1495 aaKnown RBP14.73□□□□□ -0.05
LINC01660-204ENST00000619172 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.7□□□□□ -0.06
LINC01660-204ENST00000619172 SLC24A1O60721 1099 aa14.67□□□□□ -0.06
LINC01660-204ENST00000619172 ZEB1P37275 1124 aaPredicted RBP14.61□□□□□ -0.07
LINC01660-204ENST00000619172 YTHDC1Q96MU7 727 aaKnown RBP14.61□□□□□ -0.07
LINC01660-204ENST00000619172 UBTFP17480 764 aaKnown RBP14.53□□□□□ -0.08
LINC01660-204ENST00000619172 PELP1Q8IZL8 1130 aaKnown RBP14.5□□□□□ -0.09
LINC01660-204ENST00000619172 DCAF1Q9Y4B6 1507 aa14.4□□□□□ -0.1
LINC01660-204ENST00000619172 HNRNPUL2Q1KMD3 747 aaKnown RBP14.39□□□□□ -0.11
LINC01660-204ENST00000619172 ABCC9O60706 1549 aa14.36□□□□□ -0.11
LINC01660-204ENST00000619172 CCDC180Q9P1Z9 1646 aa14.36□□□□□ -0.11
LINC01660-204ENST00000619172 SCAF1Q9H7N4 1312 aaKnown RBP14.35□□□□□ -0.11
LINC01660-204ENST00000619172 CENPBP07199 599 aaPredicted RBP14.35□□□□□ -0.11
LINC01660-204ENST00000619172 APLP2Q06481 763 aa14.35□□□□□ -0.11
LINC01660-204ENST00000619172 DIEXFQ68CQ4 756 aaKnown RBP14.34□□□□□ -0.11
LINC01660-204ENST00000619172 SCRIBQ14160 1630 aa14.32□□□□□ -0.12
LINC01660-204ENST00000619172 GTF3C3Q9Y5Q9 886 aa14.29□□□□□ -0.12
LINC01660-204ENST00000619172 NEUROD1Q13562 356 aa14.23□□□□□ -0.13
LINC01660-204ENST00000619172 PABPN1Q86U42 306 aaKnown RBP eCLIP14.21□□□□□ -0.13
LINC01660-204ENST00000619172 RSF1Q96T23 1441 aaPredicted RBP14.21□□□□□ -0.13
LINC01660-204ENST00000619172 MYT1Q01538 1121 aa14.2□□□□□ -0.14
LINC01660-204ENST00000619172 ITGAEP38570 1179 aa14.2□□□□□ -0.14
LINC01660-204ENST00000619172 ACIN1Q9UKV3 1341 aaKnown RBP14.15□□□□□ -0.14
LINC01660-204ENST00000619172 ATP1B4Q9UN42 357 aaPredicted RBP14.11□□□□□ -0.15
LINC01660-204ENST00000619172 RB1CC1Q8TDY2 1594 aa14.05□□□□□ -0.16
LINC01660-204ENST00000619172 CECR2Q9BXF3 1484 aa14.05□□□□□ -0.16
LINC01660-204ENST00000619172 CSRNP3Q8WYN3 585 aa13.99□□□□□ -0.17
LINC01660-204ENST00000619172 ZNF316A6NFI3 1004 aaPredicted RBP13.99□□□□□ -0.17
LINC01660-204ENST00000619172 MIER1Q8N108 512 aa13.93□□□□□ -0.18
LINC01660-204ENST00000619172 BCANQ96GW7 911 aa13.88□□□□□ -0.19
LINC01660-204ENST00000619172 MROH2BQ7Z745 1585 aa13.85□□□□□ -0.19
LINC01660-204ENST00000619172 CEP162Q5TB80 1403 aa13.83□□□□□ -0.2
LINC01660-204ENST00000619172 SOGA1O94964 1423 aa13.82□□□□□ -0.2
LINC01660-204ENST00000619172 ABCC8Q09428 1581 aa13.8□□□□□ -0.2
LINC01660-204ENST00000619172 CNGB1Q14028 1251 aaPredicted RBP13.8□□□□□ -0.2
LINC01660-204ENST00000619172 CCDC88BA6NC98 1476 aa13.76□□□□□ -0.21
LINC01660-204ENST00000619172 P3H3Q8IVL6 736 aa13.75□□□□□ -0.21
LINC01660-204ENST00000619172 WIZO95785 1651 aa13.74□□□□□ -0.21
LINC01660-204ENST00000619172 FAM50AQ14320 339 aaKnown RBP13.73□□□□□ -0.21
LINC01660-204ENST00000619172 HIRIP3Q9BW71 556 aaPredicted RBP13.73□□□□□ -0.21
LINC01660-204ENST00000619172 RUSC2Q8N2Y8 1516 aa13.68□□□□□ -0.22
LINC01660-204ENST00000619172 CLIP1P30622 1438 aa13.63□□□□□ -0.23
LINC01660-204ENST00000619172 NEFLP07196 543 aa13.63□□□□□ -0.23
LINC01660-204ENST00000619172 PRKCSHP14314 528 aaPredicted RBP13.62□□□□□ -0.23
LINC01660-204ENST00000619172 DDX10Q13206 875 aaKnown RBP13.61□□□□□ -0.23
LINC01660-204ENST00000619172 TNIKQ9UKE5 1360 aa13.6□□□□□ -0.23
LINC01660-204ENST00000619172 TRIM52Q96A61 297 aa13.57□□□□□ -0.24
LINC01660-204ENST00000619172 POLR3GLQ9BT43 218 aa13.56□□□□□ -0.24
LINC01660-204ENST00000619172 ARID3CA6NKF2 412 aa13.56□□□□□ -0.24
LINC01660-204ENST00000619172 WRNQ14191 1432 aaPredicted RBP eCLIP13.56□□□□□ -0.24
LINC01660-204ENST00000619172 KANK4Q5T7N3 995 aaPredicted RBP13.53□□□□□ -0.24
LINC01660-204ENST00000619172 GOLGA3Q08378 1498 aa13.53□□□□□ -0.24
LINC01660-204ENST00000619172 FKBP8Q14318 412 aa13.52□□□□□ -0.24
LINC01660-204ENST00000619172 ERICH6Q7L0X2 663 aa13.51□□□□□ -0.25
LINC01660-204ENST00000619172 KCNH8Q96L42 1107 aa13.5□□□□□ -0.25
LINC01660-204ENST00000619172 NACADO15069 1562 aa13.49□□□□□ -0.25
LINC01660-204ENST00000619172 BAZ1AQ9NRL2 1556 aaPredicted RBP13.49□□□□□ -0.25
LINC01660-204ENST00000619172 SIN3AQ96ST3 1273 aa13.47□□□□□ -0.25
LINC01660-204ENST00000619172 IRX6P78412 446 aaPredicted RBP13.46□□□□□ -0.26
LINC01660-204ENST00000619172 SENP3-EIF4A1A0A087X0R7 540 aa13.45□□□□□ -0.26
LINC01660-204ENST00000619172 SUPT16HQ9Y5B9 1047 aaKnown RBP13.44□□□□□ -0.26
LINC01660-204ENST00000619172 ANP32CO43423 234 aa13.4□□□□□ -0.26
LINC01660-204ENST00000619172 UNC13AQ9UPW8 1703 aa13.4□□□□□ -0.26
LINC01660-204ENST00000619172 PLPPR3Q6T4P5 718 aa13.39□□□□□ -0.27
LINC01660-204ENST00000619172 DAXXQ9UER7 740 aaPredicted RBP13.39□□□□□ -0.27
LINC01660-204ENST00000619172 CEP164Q9UPV0 1460 aa13.38□□□□□ -0.27
LINC01660-204ENST00000619172 EEA1Q15075 1411 aa13.38□□□□□ -0.27
LINC01660-204ENST00000619172 RAPGEF2Q9Y4G8 1499 aa13.37□□□□□ -0.27
LINC01660-204ENST00000619172 CHIC2Q9UKJ5 165 aa13.36□□□□□ -0.27
LINC01660-204ENST00000619172 ZNF326Q5BKZ1 582 aaKnown RBP13.35□□□□□ -0.27
LINC01660-204ENST00000619172 VPS8Q8N3P4 1428 aa13.34□□□□□ -0.27
LINC01660-204ENST00000619172 HNRNPUQ00839 825 aaKnown RBP eCLIP13.32□□□□□ -0.28
LINC01660-204ENST00000619172 TOP2AP11388 1531 aaKnown RBP13.31□□□□□ -0.28
LINC01660-204ENST00000619172 BAZ1BQ9UIG0 1483 aaKnown RBP13.29□□□□□ -0.28
LINC01660-204ENST00000619172 SMARCA2P51531 1590 aa13.27□□□□□ -0.28
LINC01660-204ENST00000619172 FAM9BQ8IZU0 186 aa13.27□□□□□ -0.29
LINC01660-204ENST00000619172 DHX57Q6P158 1386 aaKnown RBP13.25□□□□□ -0.29
LINC01660-204ENST00000619172 SMARCA4P51532 1647 aa13.25□□□□□ -0.29
LINC01660-204ENST00000619172 TONSLQ96HA7 1378 aa13.24□□□□□ -0.29
LINC01660-204ENST00000619172 RRP7BPQ9NSQ0 103 aa13.24□□□□□ -0.29
LINC01660-204ENST00000619172 CCNB3Q8WWL7 1395 aa13.23□□□□□ -0.29
LINC01660-204ENST00000619172 TSHZ2Q9NRE2 1034 aa13.23□□□□□ -0.29
LINC01660-204ENST00000619172 BICRAQ9NZM4 1560 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms