Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
LTBP4Q8N2S1 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC19.04■□□□□ 0.64
LTBP4Q8N2S1 ATF4P4-201ENST00000393544 1930 ntBASIC19.04■□□□□ 0.64
LTBP4Q8N2S1 C18orf15-201ENST00000623680 2534 ntBASIC19.04■□□□□ 0.64
LTBP4Q8N2S1 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LTBP4Q8N2S1 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC19.04■□□□□ 0.64
LTBP4Q8N2S1 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC19.04■□□□□ 0.64
LTBP4Q8N2S1 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
LTBP4Q8N2S1 CCDC42-201ENST00000293845 1374 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
LTBP4Q8N2S1 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LTBP4Q8N2S1 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LTBP4Q8N2S1 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LTBP4Q8N2S1 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LTBP4Q8N2S1 TRAF4-202ENST00000262396 683 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LTBP4Q8N2S1 AL121983.2-204ENST00000430592 448 ntTSL 3 BASIC19.03■□□□□ 0.64
LTBP4Q8N2S1 AC006372.1-201ENST00000449903 546 ntTSL 2 BASIC19.03■□□□□ 0.64
LTBP4Q8N2S1 ENTPD1-AS1-210ENST00000452942 864 ntTSL 3 BASIC19.03■□□□□ 0.64
LTBP4Q8N2S1 KRT18P15-201ENST00000458108 1291 ntBASIC19.03■□□□□ 0.64
LTBP4Q8N2S1 AC253536.5-201ENST00000506097 347 ntBASIC19.03■□□□□ 0.64
LTBP4Q8N2S1 NREP-218ENST00000509427 587 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
LTBP4Q8N2S1 SLC16A7-209ENST00000549465 537 ntTSL 3 BASIC19.03■□□□□ 0.64
LTBP4Q8N2S1 NDUFB1-202ENST00000553514 454 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
LTBP4Q8N2S1 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC19.03■□□□□ 0.64
LTBP4Q8N2S1 DSCR9-203ENST00000581640 472 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LTBP4Q8N2S1 DUSP22-206ENST00000603453 804 ntTSL 4 BASIC19.03■□□□□ 0.64
LTBP4Q8N2S1 UBA3-212ENST00000630585 390 ntTSL 4 BASIC19.03■□□□□ 0.64
LTBP4Q8N2S1 FKBP4P1-201ENST00000507284 1347 ntBASIC19.03■□□□□ 0.64
LTBP4Q8N2S1 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC19.03■□□□□ 0.64
LTBP4Q8N2S1 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
LTBP4Q8N2S1 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
LTBP4Q8N2S1 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.03■□□□□ 0.64
LTBP4Q8N2S1 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LTBP4Q8N2S1 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
LTBP4Q8N2S1 LINC01115-202ENST00000621134 1519 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LTBP4Q8N2S1 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC19.03■□□□□ 0.64
LTBP4Q8N2S1 SNU13-201ENST00000215956 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LTBP4Q8N2S1 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LTBP4Q8N2S1 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
LTBP4Q8N2S1 ROPN1B-201ENST00000251776 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LTBP4Q8N2S1 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LTBP4Q8N2S1 FAM96A-202ENST00000380290 826 ntTSL 2 BASIC19.03■□□□□ 0.64
LTBP4Q8N2S1 MBL3P-201ENST00000402234 644 ntBASIC19.03■□□□□ 0.64
LTBP4Q8N2S1 ACTBP1-201ENST00000417985 1113 ntBASIC19.03■□□□□ 0.64
LTBP4Q8N2S1 PFN1P10-201ENST00000455962 327 ntBASIC19.03■□□□□ 0.64
LTBP4Q8N2S1 FDPS-206ENST00000467076 1178 ntAPPRIS ALT1 TSL 3 BASIC19.03■□□□□ 0.64
LTBP4Q8N2S1 NKAPP1-203ENST00000554109 573 ntTSL 4 BASIC19.03■□□□□ 0.64
LTBP4Q8N2S1 MIEF2-206ENST00000578174 589 ntTSL 4 BASIC19.03■□□□□ 0.64
LTBP4Q8N2S1 SMIM22-201ENST00000586005 366 ntAPPRIS P4 TSL 3 BASIC19.03■□□□□ 0.64
LTBP4Q8N2S1 C17orf98-201ENST00000614158 632 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
LTBP4Q8N2S1 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LTBP4Q8N2S1 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
LTBP4Q8N2S1 RBM4-202ENST00000396053 1337 ntTSL 2 BASIC19.03■□□□□ 0.64
LTBP4Q8N2S1 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LTBP4Q8N2S1 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
LTBP4Q8N2S1 FAM90A22P-201ENST00000400142 1395 ntBASIC19.03■□□□□ 0.64
LTBP4Q8N2S1 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LTBP4Q8N2S1 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LTBP4Q8N2S1 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC19.02■□□□□ 0.64
LTBP4Q8N2S1 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LTBP4Q8N2S1 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LTBP4Q8N2S1 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC19.02■□□□□ 0.64
LTBP4Q8N2S1 AC011270.2-201ENST00000624293 2550 ntBASIC19.02■□□□□ 0.64
LTBP4Q8N2S1 NDFIP2-AS1-201ENST00000457171 431 ntTSL 3 BASIC19.02■□□□□ 0.64
LTBP4Q8N2S1 AC096919.1-201ENST00000472730 652 ntBASIC19.02■□□□□ 0.64
LTBP4Q8N2S1 IFI27L1-209ENST00000555523 680 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
LTBP4Q8N2S1 ABCC6P1-202ENST00000565118 796 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LTBP4Q8N2S1 SNAPC5-207ENST00000566658 574 ntAPPRIS ALT2 TSL 4 BASIC19.02■□□□□ 0.64
LTBP4Q8N2S1 MXRA7-204ENST00000585519 540 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
LTBP4Q8N2S1 AC034205.3-201ENST00000603595 1376 ntBASIC19.02■□□□□ 0.64
LTBP4Q8N2S1 PSAT1-201ENST00000347159 1411 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
LTBP4Q8N2S1 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LTBP4Q8N2S1 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LTBP4Q8N2S1 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.02■□□□□ 0.63
LTBP4Q8N2S1 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
LTBP4Q8N2S1 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
LTBP4Q8N2S1 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
LTBP4Q8N2S1 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LTBP4Q8N2S1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LTBP4Q8N2S1 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LTBP4Q8N2S1 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC19.01■□□□□ 0.63
LTBP4Q8N2S1 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LTBP4Q8N2S1 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LTBP4Q8N2S1 FRG1-201ENST00000226798 1074 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LTBP4Q8N2S1 OR4C6-201ENST00000314259 1020 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
LTBP4Q8N2S1 PRDX4-201ENST00000379331 852 ntTSL 2 BASIC19.01■□□□□ 0.63
LTBP4Q8N2S1 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LTBP4Q8N2S1 AL139412.1-201ENST00000441085 523 ntTSL 2 BASIC19.01■□□□□ 0.63
LTBP4Q8N2S1 PGAM5-202ENST00000454808 1084 ntTSL 3 BASIC19.01■□□□□ 0.63
LTBP4Q8N2S1 AL583824.1-203ENST00000457948 761 ntTSL 2 BASIC19.01■□□□□ 0.63
LTBP4Q8N2S1 AC108082.1-201ENST00000510857 331 ntBASIC19.01■□□□□ 0.63
LTBP4Q8N2S1 AP3M2-205ENST00000517922 1094 ntTSL 2 BASIC19.01■□□□□ 0.63
LTBP4Q8N2S1 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
LTBP4Q8N2S1 AC010601.1-201ENST00000569048 446 ntTSL 5 BASIC19.01■□□□□ 0.63
LTBP4Q8N2S1 AC005336.1-201ENST00000585431 1243 ntBASIC19.01■□□□□ 0.63
LTBP4Q8N2S1 AC006449.2-201ENST00000618407 486 ntTSL 2 BASIC19.01■□□□□ 0.63
LTBP4Q8N2S1 GPHB5-202ENST00000621500 543 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
LTBP4Q8N2S1 AC010601.2-201ENST00000623060 774 ntBASIC19.01■□□□□ 0.63
LTBP4Q8N2S1 NLK-203ENST00000582037 1503 ntTSL 2 BASIC19.01■□□□□ 0.63
LTBP4Q8N2S1 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LTBP4Q8N2S1 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms