Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYSMD4Q5XG99 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 AC018442.1-201ENST00000421439 2061 ntBASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 ALG1L3P-201ENST00000503331 765 ntBASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 RN7SKP155-201ENST00000516031 288 ntBASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 MT2A-202ENST00000561491 581 ntTSL 2 BASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 EIF5AP2-201ENST00000585668 1047 ntBASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 AC018695.6-201ENST00000614011 534 ntBASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 AC019109.1-201ENST00000401725 1874 ntBASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LYSMD4Q5XG99 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 OR52M2P-201ENST00000414298 959 ntBASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 BPIFB5P-201ENST00000457066 1099 ntBASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 AC006529.1-201ENST00000459978 637 ntBASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 CHCHD2P2-201ENST00000503744 321 ntBASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 CMC2-204ENST00000562713 573 ntTSL 3 BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 CMC2-209ENST00000565108 399 ntTSL 2 BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 COX5A-205ENST00000568517 582 ntTSL 3 BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 MIR4265-201ENST00000582152 99 ntBASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 CYP4F36P-201ENST00000589193 186 ntBASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 RPS5-204ENST00000598098 536 ntTSL 2 BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 AL139339.2-201ENST00000608063 657 ntBASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 AC148477.9-201ENST00000623974 539 ntBASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC14.03□□□□□ -0.16
LYSMD4Q5XG99 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms